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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003753 ID=TCONS_00003753|Name=TCONS_00003753|organism=Clytia hemisphaerica|type=transcript|length=579bp
GGAAAACACACGAAGTTTCTTCTCCTGCCTTTCAAAGGATTTTCATTGCT
GTTTTAAAAGTTCGTTCATCACTCAATAATTCAAAATGGCTGCTATGTTA
CGAGCTCTTTCAAAACCATTAAATATGGCTGCTGGTGTTGGCGCCGCCGC
ATTGGGTTTAGCCGCCGGTGCTATGGGATTCCCTGAAGCTGCTAACGATT
GCAAGTCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATGGAT
TATCCTGATTTATCCAAACACAATAATTGTTTGAGTAAAGTATTGACACC
GCAAATGTATACTAAACTTCGCGATTTGCAAACACCATCAGGTTATACAC
TTGACATGGCCATCCAAACAGGTGTTGACAATCCCGGACATCCGTTCATT
TCAACGGTCGGTGTTGTTGCCGGTGATGAAGAATCTTATGAAGTCTTCAA
AGAATTGATGGACCCCATTATCCAAGACAGACATAATGGTTTCGGACCTA
ATGATCGCCATAAGACTGATCTTGACGCCTCCAAAATTAAaggTGGCAAA
TTTGATGAGAAGTATGTTTTGAGTTCACG Run BLAST on NCBI protein sequence of TCONS_00003753-protein >TCONS_00003753-protein ID=TCONS_00003753-protein|Name=TCONS_00003753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MAAMLRALSKPLNMAAGVGAAALGLAAGAMGFPEAANDCKSQVKKAYRQF
MPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNP
GHPFISTVGVVAGDEESYEVFKELMDPIIQDRHNGFGPNDRHKTDLDASK
IKGGKFDEKYVLSS Run BLAST on NCBI transcript from alignment at sc0000031:609754..613445+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003753 ID=TCONS_00003753|Name=TCONS_00003753|organism=Clytia hemisphaerica|type=transcript|length=3692bp|location=Sequence derived from alignment at sc0000031:609754..613445+ (Clytia hemisphaerica)
GGAAAACACACGAAGTTTCTTCTCCTGCCTTTCAAAGGATTTTCATTGCT
GTTTTAAAAGTaagttttatgtttatttaCTATGACTcgacagtagcgta
gacaagggggGGGGcgtaaaatttgtgtaggagagcagatttttgtgAGA
CAgtgattatctttttatattacgaatagataattacagtgtcataaaaa
tctgatctcctacacaaattttgcgcccctcctgtgtACGCTACTACTCG
ATTAATCACTTGGTAGTTCTTATATTTCCTTTTGATGAAGGGCTTTTTTC
TAAACTAGTGCAGGGACAttaaaaacaagctagatgctgaatggacctac
ctgatgatgaaagttagatagcaatgcaaggagaaaaatgaaaaaaaatc
agtcagaaaacatagcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNtttccggcattttcaaccggaaaaaaaaatttctcaaa
aatcgaactcagccatgttttgggcaatattaatacgcatcttagagcaa
aaaaacagaaaaaactaatgataaaatctcgagaaaatgccaaaaaaaca
gtttttccggcatatgtccggaaaaaaatgtttttcgaaaatcgggctcc
gtcactttttaggtattgtcattttacatcagtgtgcaaaatttcataaa
aaaatataaagtacaNNgatgtttttgtgtgaaaaaacaacgaaatataa
ggaaaaagtccgatgaaaatatgcaaaaacggcgatttccgacatatttc
cggcattttcggccggaaaagaatttttctcaaaaatcggactctgccat
gttttaggcattgctaatacgcatctttgtacaaaaaatctgaaaaaact
aatgatgaaatctcgagaaaatgccaaaaaaccggtttttccggcatatt
tccggcattttcggccggaaatgattttttttcgaaaatcgggctccgtt
acattttgggcattaccattttacatcattgtgccaaaaatcagaaaaaa
ctaatgagccaatcctgagaaaagctggtaacagacggacggacgaacga
acggacggacggacggacggacatcggttaatttataggacctctacccc
accggggtaggtccaaaaagttaaCGTGTGAATGGCGGTAGGGAGGGGTT
GTAAGGGTGGCATATACAcgatatttttataagaacgtaaaaaacttttg
aagccttcgaatgatTTTTTAATAATGTTCTcgacatgttcttattttcg
ctatTTTATAAGTATTTTGTCCATTTAGGAGATTGGTctttttagagtcc
gcaaagttttgaaatgttcttaacgtgtcCTTGATATTTTGACCATCAAA
GCCGTATGTTCCTATATAGTTCCTAAATTAGAGGGATGTTTTTCAACCAT
CACGGCGATTTACGGAAAAATAGTGGCGGTCGAGTTTGGAACAGACACAG
TAAAAACCTACATCACTGTTCACAATACCCCGGGCTTaccacttttttca
aatttatcccgtcTCCAAAATTATTCTCTTTTTAGTGACTTTGTGTAGGG
TAGGATCGTCTATTTATCGTTTAATCCAGAAAAATGATGAATCGTCATCG
AGAATTgggcttttcctgaaaaaaacccctgttgaggaggtccaagcttt
tgtgacctacccccttgaaattccaggcaattttaggatcatacccctct
ggaattccgaatttttacaaattttcaatcattacccccttggaattccg
cttattttttgacggattttcgtagaATTGATAAGAGGAATATTTTTGTT
CTGAGATTTACGATTTTATTTTTGTAGGTTCGTTCATCACTCAATAATTC
AAAATGGCTGCTATGTTACGAGCTCTTTCAAAACCATTAAATATGGCTGC
TGGTGTTGGCGCCGCCGCATTGGGTTTAGCCGCCGGTGCTATGGGATTCC
CTGAAGCTGCTAACGATTGCAAGTCTCAGGTGAAAAAAGCCTACAGACAA
TTCATGCCGTGTATGGATTATCCTGATTTATCCAAACACAATAATTGTTT
GAGTAAAGTATTGACACCGCAAATGTATACTAAACTTCGCGATTTGGTAA
GTAGTATTGTTTATATTTGACCAATTTACCTTTAGAAACAAGAATCGAGC
ACTCTTTTGATGGATAAAAGCATTGCTTCAACAAAATAGAAACAagaatc
aaaaataatttagattTGCCGATcgacatattcaatttttcggAGAAATT
CGCCAGAGttgattttaacaaacttgCTGGCCTAGCAAAAACACTCCTTT
TCGATTCCGTTGATgtcgtttttttttgctcaacaTTCTATCCTCGCCAA
AAAGGAACTATCGGCCACCACGCAGTCTCATCAGAATGTTTGTGTACTCC
AAATCATTAGTTGATTGATTGAAAGATTTCAACCTATTCTTGCTCCCGAA
ACCtctctttttatatttttccagcattttgtcatatttttatcATGTAT
AAAACTGTGAATTTGCGCTAGGGCACTACAAAGACAAAGACTTGATTTTT
AACATTCTATAAATATTTCAATCGTATTAAAAGCATTCGTTATGCTTTCG
GGACTGCAAAATGCTGGTTTATGCTAAAAGGAAtgctaaaaaaaatttgt
ccATCTTCGGCCTTTACAAATATCtccctcaaaatattttcatataaaaa
ttctACTATTTCAAAACCCATTATTTCACCATCACTTATTTTTCCAGCAA
ACACCATCAGGTTATACACTTGACATGGCCATCCAAACAGGTGTTGACAA
TCCCGGACATCCGTTCATTTCAACGGTCGGTGTTGTTGCCGGTGATGAAG
AATCTTATGAAGTCTTCAAAGAATTGATGGACCCCATTATCCAAGACAGA
CATAATGGTTTCGGACCTAATGATCGCCATAAGACTGATCTTGACGCCTC
CAAAATTAAaggtatgttttttttaattgcgtAACACTTTTTAATAGAGT
CTCCAAACAGTGGAGCCTCCAAACGCAAGcgaaacacaaatttgtttgat
ttAAGGAAATTTCTAGTTATCGaatattgtttttaaaacataTTGGTAGC
TGAAGGGACCAGCTAAATTTtacgagttaaggagacattagagttgtaga
ggttcgagttagtTATCCACtgtataatttttaattttttttaaaacgaT
TCTTTGAACTGACTGAGTAGCAAGTTATCATATCCAAAGCTTTTTCTTCT
CGAATGACCAAAAAAGTATGAGTTTTTCATAAACACGCCATCCGGGTTGG
AAGGATTACCAGTTTCTGTAGAGGTGGCGACTCGCTAATTTGGACTACAT
AGAGAAATATAATTTGTTCGAATAaaagagagattcgaataatagaaagt
gCTTAATGAAAGTTTGTCCTTGAAGGATCTGAGATttagttcgaataata
gagagaTTTGAATGATAGAAGTTGGTATTAGCGAAATTTCACTGTAGATT
ATAGAATATTAGCGGGTGGGTTTAtaaaaaattacatcaaaattttcttt
tgtaggTGGCAAATTTGATGAGAAGTATGTTTTGAGTTCACG Coding sequence (CDS) from alignment at sc0000031:609754..613445+ >TCONS_00003753 ID=TCONS_00003753|Name=TCONS_00003753|organism=Clytia hemisphaerica|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000031:609754..613445+ (Clytia hemisphaerica)
ATGGCTGCTATGTTACGAGCTCTTTCAAAACCATTAAATATGGCTGCTGG
TGTTGGCGCCGCCGCATTGGGTTTAGCCGCCGGTGCTATGGGATTCCCTG
AAGCTGCTAACGATTGCAAGTCTCAGGTGAAAAAAGCCTACAGACAATTC
ATGCCGTGTATGGATTATCCTGATTTATCCAAACACAATAATTGTTTGAG
TAAAGTATTGACACCGCAAATGTATACTAAACTTCGCGATTTGCAAACAC
CATCAGGTTATACACTTGACATGGCCATCCAAACAGGTGTTGACAATCCC
GGACATCCGTTCATTTCAACGGTCGGTGTTGTTGCCGGTGATGAAGAATC
TTATGAAGTCTTCAAAGAATTGATGGACCCCATTATCCAAGACAGACATA
ATGGTTTCGGACCTAATGATCGCCATAAGACTGATCTTGACGCCTCCAAA
ATTAAaggTGGCAAATTTGATGAGAAGTATGTTTTGAGTTCAATGGCTGC
TATGTTACGAGCTCTTTCAAAACCATTAAATATGGCTGCTGGTGTTGGCG
CCGCCGCATTGGGTTTAGCCGCCGGTGCTATGGGATTCCCTGAAGCTGCT
AACGATTGCAAGTCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTG
TATGGATTATCCTGATTTATCCAAACACAATAATTGTTTGAGTAAAGTAT
TGACACCGCAAATGTATACTAAACTTCGCGATTTGCAAACACCATCAGGT
TATACACTTGACATGGCCATCCAAACAGGTGTTGACAATCCCGGACATCC
GTTCATTTCAACGGTCGGTGTTGTTGCCGGTGATGAAGAATCTTATGAAG
TCTTCAAAGAATTGATGGACCCCATTATCCAAGACAGACATAATGGTTTC
GGACCTAATGATCGCCATAAGACTGATCTTGACGCCTCCAAAATTAAagg
TGGCAAATTTGATGAGAAGTATGTTTTGAGTTCAATGGCTGCTATGTTAC
GAGCTCTTTCAAAACCATTAAATATGGCTGCTGGTGTTGGCGCCGCCGCA
TTGGGTTTAGCCGCCGGTGCTATGGGATTCCCTGAAGCTGCTAACGATTG
CAAGTCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATGGATT
ATCCTGATTTATCCAAACACAATAATTGTTTGAGTAAAGTATTGACACCG
CAAATGTATACTAAACTTCGCGATTTGCAAACACCATCAGGTTATACACT
TGACATGGCCATCCAAACAGGTGTTGACAATCCCGGACATCCGTTCATTT
CAACGGTCGGTGTTGTTGCCGGTGATGAAGAATCTTATGAAGTCTTCAAA
GAATTGATGGACCCCATTATCCAAGACAGACATAATGGTTTCGGACCTAA
TGATCGCCATAAGACTGATCTTGACGCCTCCAAAATTAAaggTGGCAAAT
TTGATGAGAAGTATGTTTTGAGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003753-exon-sc0000031-1491911889:609754..609812 | TCONS_00003753-exon-sc0000031-1491911889:609754..609812 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1510915933:609754..609812 | TCONS_00003753-exon-sc0000031-1510915933:609754..609812 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1575043694:609754..609812 | TCONS_00003753-exon-sc0000031-1575043694:609754..609812 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1491911889:611681..611949 | TCONS_00003753-exon-sc0000031-1491911889:611681..611949 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1510915933:611681..611949 | TCONS_00003753-exon-sc0000031-1510915933:611681..611949 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1575043694:611681..611949 | TCONS_00003753-exon-sc0000031-1575043694:611681..611949 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1491911889:612601..612814 | TCONS_00003753-exon-sc0000031-1491911889:612601..612814 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1510915933:612601..612814 | TCONS_00003753-exon-sc0000031-1510915933:612601..612814 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1575043694:612601..612814 | TCONS_00003753-exon-sc0000031-1575043694:612601..612814 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1491911889:613409..613445 | TCONS_00003753-exon-sc0000031-1491911889:613409..613445 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1510915933:613409..613445 | TCONS_00003753-exon-sc0000031-1510915933:613409..613445 | Clytia hemisphaerica | exon |
| TCONS_00003753-exon-sc0000031-1575043694:613409..613445 | TCONS_00003753-exon-sc0000031-1575043694:613409..613445 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:609754..613445 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR022413 | ATP-guanido_PTrfase_N |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016301 | kinase activity |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016301 |
kinase activity |
| molecular_function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
Blast
BLAST of TCONS_00003753 vs. Swiss-Prot (Human)
Match: KCRS (Creatine kinase S-type, mitochondrial OS=Homo sapiens GN=CKMT2 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.790e-51 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 2
Query: 206 SQVKKAYRQFMPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNPGHPFISTVGVVAGDEESYEVFKELMDPIIQDRHNGFGPND-RHKTDLDASKIKGGKFDEKYVLSS 577
++V++ R F P DYPDL KHNNC+++ LTP +Y KLR+ TP+GYTLD IQTGVDNPGHPFI TVG+VAGDEESYEVF +L DP+I+ RHNG+ P +H TDLDASKI G+FDE YVLSS
Sbjct: 39 AEVREQPRLFPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQFDEHYVLSS 163
The following BLAST results are available for this feature:
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