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Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000232:36063..45122+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113958 ID=BlTCONS00113958|Name=BlTCONS00113958|organism=Branchiostoma lanceolatum|type=transcript|length=9060bp|location=Sequence derived from alignment at Sc0000232:36063..45122+ (Branchiostoma lanceolatum) GGAGAATTCACGCTCATAAGCTGTGTTGTTGCACCAGGTAGGTATTACAA
AATGTTTCAAGGCAAGCTATTAAAGACTAGCAAGAAGCAGAATGTTCAAT
ACTACAACTACTAACTACTACTACTACTATAACTGCTACTACAACTACCA
CTTCTACTACTTCTATCCCTTCCACTACTTCTATCACTACTTCTTCTGCT
ACTACAGTCAAACCTGCCCAAGTACTATCACTATTACTACTGCTACTACT
ACTACTACTACAGTAACTACTACTGATAATAATAAAGATAAAAAAGATAA
TAGTACTGTCTAAGGATAATACTAATAACAACTATTGTAACGCGTGTTTC
TTCTCTTTTGTGTGCAGATATATGGTTATTAGTAAGAGTATTCTTGCGTC
TAAAACATGGAATGACATATTTTTAACACATAGAATACGTTACCAGCTAC
TGAATGTTTTTGCAGGCTTTGACTGGAAGGGTTTGGAGCTCGGCCAGAAA
GAAGAGTTGGTGACGTCATTTCCTCATCTGGCTGACGTCATTAAATATTT
TTGTAAACATTAGCTAAAAAGTAAGCTTAATTTCCGAATACTGTGAGCGG
AGATATTAGCACGTGATTTACGTTAGGTTTAGGCGAATTTTTCTTGTGTT
TTATTTTTTGTACTGTTTCTTTCTTCTTCCATAATTTTTACATCGTAGGG
GGTAGCATTGTATGGTTTTAACATTAAGTTCGTCTGAAATCTTGCACCGT
GTATATTCTTTATAATCATTTTTGATTTATGAGCCTCCTAAGGTCTATAT
TTTAAGATATTCAGGTCATAGGGAATAATTACATTGTATGCTTTTCAATC
ACTAGCGTCATGTGGAATCTGGCACCGTGCTTTTTGTACTAATATTCATT
TTAACTTAATTTTTCCTTTACTCTATGAGCTTCCAATTGTAAACATATAT
TTAGCAAGTTGATCGATGATTTCATAACGTAGAAGGGCGTTGACATATTG
TTGTATTTCAAGCGCTGTTGAATGTTGGCTGTTTATTTTGTGGTTTGGTA
TGATACTGATGATAATCTGTGTGCCTCAGCAGTTTCTTGCTATTAAAGTA
TTTCACAGCAGATAACGAGCGAAGTGAACTCAAATTAAACCTCGACCCTA
GAAACCCTTGCGCGCGTGCGCTATCGTGGACCTGGGTTACGATAGAATTG
GGGTTTTGTACCGTTAAGTCTGTCGCGTGAGCAACTCTAAAAAAAAGTAA
AACTAACTTCATTCATCACAAAAGAAGGGAGAGGTGTTTCTGAAAAGGGG
CGTTGTCTCGACTGATGTATATAAAGCTGCTTAGATAATCTTGGGTATTC
TAAGGAAAATAAGATGATTTGAACGCACACAAACATTTGTTAAATGTGTG
TTTGATGTCGTTAATAATTTCATCAGGTTGGTGAAGGATTAAATTTCAAA
GTTGGTGAGATACATTCAATGGTTGATTAGTCTTTTAATAGTTGATTAGT
CTTTCTCATGAATGGCAATTAGTATTTTTTGAACCGCCTTACAAAATGAA
AAGTAGGGTAGGTGTTAAATAGATAGTCCGGGATATGGCTGACAGGATCA
TGGACATACTGTCTACAAAATTCTATAGGGACGAGAATATTCTTGTTGTC
TGGAATATCCTGTCAATAGTGCCAAACATTCTTATTGACAGGATGTAAAA
TAATTATTATTTACAGGGTCTTGTGAATAAAACCGAATTTTTTTATTAGC
ATGATTAGCATATGATTTTGTAAGCCATGTCATAAACTATCTACATACCA
AAAGCCATGACGATCCATCATTACCTTCTTGAGTTATTCTCTTTCAAAGT
TTAAAACAAAATCGGCTACTGCAGTTCAAAAAAAATCCACTAGGGGCCCC
AAACCTGTAGGACTTACTCTCCTTTCCAAGAGATATCTGCCACCATAGTA
TGTCTCGAACACGAGATGTTGAAACCGGAAGTTCCGCTGCAGTACCATAG
CAATCTGCTAGGTGGCCCAAAATGTAATCATTTCGTGGTCTCATGAAGAC
CTACCGACATACTAAGTATGAAGACAATCCATCCAGGCATCAAGGAGTTA
TTGTGTTCACCGACACACACACGAACGCTGACGAAAACTTACCCTTCTAG
GCGAAGGTAATAGTTCAGAGTTCAAAGGCGGTATAACGTTACGACAGGAG
AATAGACAATGAAAGTGGAAAAACCGGTTCCCGCATTAACGTTTGCTCTG
TGGATGGCAGACAACGACTATAACAATAAGAATATTTTAGACAGCCTTGT
CTTTTGTCGCTGCAAGAAGTGGATTAAGTCGGTCGAAGATGTCCCAGGAA
ATGACGAAAACGAGGTATGTTTTAGCAAATATACAAAAGTAACGGGTTCC
TCACTAGTATTGCAGTGCTAAATCAACGGGTCGAATCGGCCTCAGCACTG
GGGGCCTAGTGCTGAAGAAAGTTCAGCAACAACAAACCTCAGGCAGTTTA
AGGCCTGTGCTAATTTCTGTCGAACATGAATTTCAAACCACTCAGTGACC
GCAGGTAACCTTGCTAGACCGTGACGTTTTCAGAATGGTCCAATGGTACA
GTGTAACGTTATCTTGCAAAAATAGGAATTCACAAGACATTTGGCATACT
AACTACTTTTGATAGGACTTATCGATAATAACCGTGCAGTTATTGATCAA
GTATGTACCACTTATTGACATAAGTAGAGGCTATTAACAAAAAGGGACCC
GCGTGGAAGCTGCAAAATGGTACCGTCCGAACATGTTCGAACGTTCGAAC
GGCCCCCCGGGTTGTAGTTTGGCGCGAAAACGGCTGGTATTTATACATCA
GCTGGGGACGAACAGTAAACTAAAATGGTTATTTCTAAATCAAAATCATT
GTACAGCAAGGGAGATTGTAGATTTATTACCTTCATGAAAAATGGAGATA
TAGTTTTGGGTGTGTCTGTGTGTCTGTGTGTTTGTTGGTCTGTTTGTCTG
TTTGTCTGTTTGAGTTTCCGGACCACTGTAGTCAGCATAACTTAAGAACC
TCTGGATAGATTACGAACATATTTGGTATGTGGGCAGGTGTTATGAAGCC
GAAATTCAAGGTCAATTTTGGGCCCCCTGGTATGTGACCTTGGCACTGCA
GCAGAAATTCAATTTTTGTATCGCTTGCCCTGGACGTGCTATGGTCTTGA
TTTTTTGGCGGCAGATAGCTTGTGGTGTAATGAAGACGTGGTGTGGGTTT
GGGCCCCCTAGCAGCTTGCTCTGGAACTACAGGGGCGTTATCGTGAAAAT
CTTCTAAGGAGAATAACTGAACAAAGGAACGATGGATTTCCATGATATTT
AGTATACAGGTAGCTTAGACAGAGATGTACACAATGAAGTGCAAATTATG
TTAATTAGGACTTCATTTCATAACTAATGAGGTAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGTCG
TTTCAAAGTGGGCACAAGCCCATTTAATAACATATACATTTTTTCACCAA
TAAGTGAGTTTTTCACCCCAAATATATGAGATTGAAAATTTTCTTGTTTT
GATATTCTAAATATTTGGTATTTACACCACCTGGCCAAATTTTGTTGAAA
ACAGATAGATACATCAAAAGTTATGGTCATATACTGCTAACCTAGCCAAC
CCCTAGGTGTCACATGACTTATTGGGCTGAATAGTGCTGTACGGTCCTTG
TTCCAGCGCTGAAGCCCACTTAGGACAGAAATTTTAGTTCTAGACCCCGT
GTCAGCACTGGATTTCCAGTGCTGAACTTCTCCAATCACTGTTTTTCTAG
TGCTGAACTCATCTCATTGCTTGGTTAGTCTCTACCAGACTAACTACATC
GGCTAACTACTTGCTAATCATTCCTTTTTCTGACAAATTCTACGATCCAT
ACGCCCTTAGGAGGGCCTGGTGGAGGCTAGCACTTGGTTTGCTAATGCTG
AACTGTCAGCGCGATGGCGGCAACCCAGTTCAAAGGTCATTTAGCACTGA
ATATCCAATGCTGAAACAGCACTTGAACCGAGTACTCATATACAAAAGTA
AGAGGTTCCTCCCTTAATTTACCAGTCCTTGGGGACTTTCCAAAAACCAG
TTTGACCTTTGAATCCTTATTCTTAAAACATGTTTTCGCTTTAACCCCCC
TGAATATGTTCCCGGTAGCGGAGCGACTGATATTTTTCAGGGCGAACTGA
GCATTTGCCTAAAAAATAGCTGTCTGCACCGGGCCAAGACTGTCGTTCGA
GTGGAATAACTTGACAAAATTGGTAAATACGTAATATTGACTTGATGTTT
TCTATAAATGCCCTGCCTTCCTACATGCAGTGACCCCTTGCTCTCCACGA
GATTCCTCCAGGAAGCCCTATCCCATTGCCTTCGCTACTCATCTCAATCT
CTAGTACCAGCCTAAATGAGACACATGTTCACGTACTGTAGAGATAGGGC
AACTAGAACAACACGACAAAGCAAGTCTAAGCTACTGTATGTACCAATGG
TCCGTAGAGAAGTATATAAAAGGTCTGGCACCAAACTTGAGAACGGCGCC
TTCAGTTGCAACATTTGAAAATATGTTGCAACGAGAAACTATGAACTGAA
TATGATTACCGAATATGGAAATGATGTTATATCGTCGACTTATCTTTATA
TGCTGAATATGATTATGGAATACTGATTGTAACGTTATCTTTGTATAACA
ATTTATGTTTTATTTTCAGATGGTATGTTGAAAGGACCCCTGACCTCCTC
CCTTGAACTCTTGAAAAACGGCCTCGGCCGAATGAGTGCATGTTTTGCGT
ACTTTCAAGGTTAAATAAAGGTTGAAAAAAAAAGGTCAAATGGTCCTTCC
ATCGTTTAGGTAGCGATCTATAAGTGATTGCATACAATACATCTGAATCG
TAATATAAGGTCTTTACCCCATGTACCCTGCATGTTAGACCCGGGTGAGA
TCGGATGTGACATGGTTTGTTTATTCAATATTCTACAGTAAAACAAACAA
ACAGCCTTGCAGGTAACCATTGTTAACCTAAATTGCGCTGGAGGTTACAG
CTAAATATATACATTGAATAGAGGGAGATTACATTTACAGTCAGATAGTC
TAAAATCACAATTTCTATTGTATGATTCATTTCATCTGTTCGTTTACAGA
CTGAATTATTATCTTCAACCATAATTGCACGGGGTGTTTGGGCGTACTGC
AGGGTGATTTTGGAGATACATAGTAACGTTTTAGACGATGTCGACGTCTT
ATTACTTGCTTTTTTTCTCCAGTGGATTCCATCAGCTTGTGGAGCTGTAC
AACATGCGGGAACATCCCGAGGGAGGCTGGTACAACGAATCCTTTAGGTC
GCCCGTCCATTTTAAGGTCCATTATTACCTTCGCCAAGAAGGTTATGTTT
TCATTAGCGTTCGTTTGACATCTCGTGTTCTGGACATGCTGAGGTTATGA
TTCTATAGATAGCAAATAGCTCTTCGGTGGAAGAATAAGTCGCGTAGGTT
TGGGCACCCTAGCGGCTTTCTTTTTTAATCTGCAAGAGTTGATTCTGTTT
CAAACTTTGAAAGAGGATGACTCAAGGAGGGATTGACGGATCGTCATGAT
TTTTGATAGGTAGATGGCTTATGATTTGTTTACATGATCATATGCTTTTT
GTGCAAATCAGGATCTAATTTGTGTAATTAATGAGGAAAAAATAAAACCC
GCTGCATAGGACTCTCAAAATCTGACATATATGACTGAGAAAGAGAGAAA
TATTGATAGATATCAATTATGCAAATAAAGACCTGATTTGAATAATTGAT
GTGAAGATGCTATAAATCCACTGTGGTAAATGACGGTAATTTCACTTTTC
CAGCATTTAAGAAGTAAGTGAATTTGGACGTTTTCGGACATAAATCGTGT
GAGCGAGTGCCTCATTTACTTATTTTATGATGTAAGGCCTTAGGTTTTTC
TTCAAGATAAGACTTCCATACTTTGAACAACTTTTGTTATTGGAGTAGAG
AAGTCAACTGATCAACTGATATATTTCATGCAGATGATAACTTAATGTGC
ATAATCGATGAGAAATATCATATGTCATTTGAATAGTGTCAAGACAATTG
CAGTAGGAGAACACACAAGATTACTACTCGAAAAGGTAAACTTTATTTGG
CGAAGGTATGAGGTCGTGGAACTCCCGTTTATCATACTGTCATATAATAT
ATTTTGCGTGTATTTGCGTCGACCGCAACTGCATCTTTAAGATATTTTTC
ATATATTTTGAACCGCATATGCATCGTTCACTTTTCAATAAAATACCATA
TAAAATGAATTATCATTTGATGTGGACCAATTACAAGCCTTCATTCCTCC
CTTCGCTCACTCGGTGGTTTATTTGATCGGCTATAATAACCTGCCAAGCG
TTATCTCACTGTAAACATCGTGGGAAAGGCGGGTAATTAGCATTTAATTA
GTTGATTATGTAACGACCCCTTTCCCACACAGACTGAAGACGGCACAGAG
TCTACCACCGCCACAGTTTGTTACTACCTGCTGCCTGAAGTGGTACGGTC
CACCTGGCGCCGACTGACGTCAGACGAAATATGGCTGTACCAAGATGGCG
GCTGCCTAAAGGTACCTGTGTTTCTGCTTCACCGTCCAACCAATCAAAAA
GACATATATGGCATATGACAATGGCTGTATTTAGGACACAAAACTTAAGC
TTTCAACCGTACTTAAAAGGCATAGCTGATCCGGTCTTTGTTTAGGTACT
AGTATGAGTGGATCCAGTGCACTTGTCTGTCATGGCTCTTTATGTAAATT
AAGCCAGTACGCATGATTTATGCATTGGATAAAAAGTGCCAGAGATAGCT
TAACTGTGCCCCTTGCGGTGGTTAGTTCTAAAAGAAAGCATATCTTTAAA
ACTGTGAGGCTATTCACTTCCAAGTATATTTAAAGGTGTACTTGATATTA
AAACCTCGTTCGATGTTTAATATTGCAGATTTATATGATCGACGCAAACG
GCATTTACTCTACCGCTGTCCTGGGAAGCACCATTAGACACGGAGAAGCC
AGGTATGAAGTTCTTGTGCCTGCTGGAGTTTGGGGTGCAGCAGAAGTTAT
GCATGGCGGAGAATTTACGCTCATAAGCTGTGTTGTTGCACCGGGTAGGT
ATTTCAAAATGTTAAAAGGCAAGCTATCAAAGACTAGCAAGAAGCATAAT
GTTTAATACTACAACTGCTGCTGCTACTACTACTGCTACTATCATTTCTA
CTGCTACTACGGCTGCTACTACTACTACTTCTGCTTTTTCTACCACTTCT
ACTGCTATTACTACTACTATTTCTACTACCACTACTTCCACTACTACTAC
TACTTCTATTACAACTACTACTACTACTACTGCTGCTATCATTTCTACTG
CTCTTACTACTACAGTACTACTACTACTACTACTATCACTTCTACTGCTA
CCACTTCTACTACTTCTTCTACTACAAATAAATTCTCACTATTGTAACGC
GTATTTCTGCTCTATTGTGTGTAGATATACGGTATGCCAAAGACATCTTT
GATACTTATTAGTAAGAGTATTCCTGCATTTAAAAAAATGTAAAGACAGA
CTTTGTAATACATAGAATACGTAACCAGCTACTGAATGTTTTTTTGCAGG
TTTTGACTGGAAGGGTTTGGAGCTCGGCCAGGAAGAAGAACTGGTGACGT
CATTTCCTCATCTGGCCGGCGTTATTAAATATTTCTGTAAACATTAGCTA
AAAAGTAAGCTTTATTTCTAGATTCTGTGATTGAACATACGTTTTATTAG
CACGTGTTTTATGTCACGTTAAGGAATTTGTCTTGTATTTTATTTTTTGT
ATTGTTTCTATATTTACATTTCCTTAACTTCAACATCGTAGGGGGTAGCA
TTGTATGGTCTTAACATTTAGTTCGTTTGAAATCTTGCACCGTGTACATA
CTTTATGATCATTTTTTTTATTTATGAGCTTCTTAAGGTCTATATTTTAA
GATCTTCAGGTCATAGGGAATAATTACATTGTATGCTTTTCAATCATTAA
CGTCATGTGGAATCTGGCACCGTGCTTTTTGTACTGATATTCATTTTAAC
TTAATTTTTTCTTTACTCTATGAGCTTCCAATTGTAAACATATATTTAGC
AAGTTGATCGATGATTTCATAACGTAGAAGGGTGTTGACATATTCTTGTA
TTTCAAGCGCTGTTGAATGTTAGCTGTTTATTTTGTGGTTTGATATGATA
CTGATGATAATCTGTGTGCCTCAGCAGTTTTTTTGCTATTATATTAAATA
TGTATTTCACAGCAGATAACGAGCGAAGTGAACTCAAACCTCGACCCTAG
AAACCCTTGCGTGCGCTATCGTGGACCTGGGCTACGAAAGAATTAGGGTT
TTGTACCGTATAGCCTGTCGCGTGAGCAACTCTAAAAACCCCAAAACTAA
CTTCATTCATCACAAAAGAAGGGAGAGGTGTTTCTGAAAAGGGGCGTTGT
CTCGACTGATGTATATAAAGCTGCTTAGATAATCTTGGGTATTTTAAGGA
AAATAAGATGATTTGAACGCACACAAACATCTGTTAATGTGTGTTTGATG
TCGTTAATAATTTCATCAGGTTGGTGAAGGATTAAATTTCAAAGTTGGTG
AGATACATTC
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
BlTCONS00113958-exon-Sc0000232-1564993656:36063..36099 | BlTCONS00113958-exon-Sc0000232-1564993656:36063..36099 | Branchiostoma lanceolatum | exon |
BlTCONS00113958-exon-Sc0000232-1564993656:36528..36854 | BlTCONS00113958-exon-Sc0000232-1564993656:36528..36854 | Branchiostoma lanceolatum | exon |
BlTCONS00113958-exon-Sc0000232-1564993656:44450..45122 | BlTCONS00113958-exon-Sc0000232-1564993656:44450..45122 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000232 | genome | Sc0000232:36063..45122 + |
Properties
Property Name | Value |
GeneID | BlCUFF055863 |
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