TCONS_00003338 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00003338
Unique Name	TCONS_00003338
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2245

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000026:362158..376831-

transcript sequence

>TCONS_00003338 ID=TCONS_00003338|Name=TCONS_00003338|organism=Clytia hemisphaerica|type=transcript|length=2245bp
ATCCCTTTGAAATCTCGTgcctaaaaatggtagacataGCTGACCGTTCC
AAATAACCGAGAAAGCAAGGAGAAATTCACTCAACAATATGTCAAGAATC
AATTAATGGAAATTGCTCAACAATGTACTCAACCAGAGGCTGAATTTTGG
AAATGCTTGGATAAATCCGCTCTCATGAAAGATTTCCGGAAAAAGAAGCG
GAAATACCATGGAACATGTTGCAAAGAAGCCATACATACTTCATGCGAAG
TGGAGTGTTTGACGACTAAGAAGATCTCcaaattgttgaaaaatgaaaga
tgtAATGCGAACAGAGAACCGAAATTCACAAGCTGTATCAAAAAAGTTCA
CGCTGCACGGAAATGCTGTAGCGGGTCTACAAAAGAATGTAAACACTCGT
GTATGCAGTATTTCAAGAACGTACGTTCGAACAATGTCCTTCAGTtgaaa
cagatttttcaaaagaaatgtgGACGTCGATCAAAACAGTTCAAATGCGC
TTTAACCAACTCCAACTTTGATCGTGCCATTCAGAATGTTAACAACTGTT
GCAATCATAGCCATAATAAACGATGCCATAATTCGTGTAATAGGGTATTA
GGTAATTTGGACAAAGATTTCAAAACAGCATTCAAACAACTAACAGATGA
TTGTGGTGAACTACACGTTAACTCACCATTGTACAGGTGTTTATTGGATG
CTAACACACAAACACAGAGGATCGAAGATGTACCAAACCGTGGACGAACA
ACAATCCGTAAACCAGCTTACCAATCGTTCAAACAACAATGTTGCGATCG
TGCTGTGTCTCCCGATTGTCGTAAGTGGTGCCAAGAAACGATGGCTGATC
CTAAACTCATGTTGTCGTTATGGGGCACCATGTATCTTTCTTGTATACAA
AGTCCAAAAGAAGTAGCGTTGTCCAACTGTATGACTGATGTTTTCGAGCC
ATGCGAAATCGGCGTTAAAGAGCCAATGACCTTTTGCACTAACCTGAACG
AACATCCTATGTCTTTGTTCCGGCGTGGAGACCAGTCCGGTGATTTGACC
GCCCGGAAGTTGCATAAATTCTGGTCAGACGGAGTTGTGAAAGTCTTTGG
TTACAAGCTTGTGTTCAAAGATATTTCGACCTGTCAACCAGAGATGTTTA
AAGCAATGGCTTGTCTCCTGGCAACCAAACCATGCGatcacagacattct
cagatacAAGTGTGCAGACATGACTGTGAAATCCTACTGACGGAATGTTT
GAATCACGATATTTCCGATTACGCTCCGAACACAGTTCAAGATATTTGCG
CCAACATCTTACCAAAtaataaccaatcaaattgcatCCCGTTACGTAAA
TACGCCGTAAGACAGACCCCGTCAACGGCTCTATTAAGGCGCGTTAAGCC
GAGAGAAGATGTGACGTTACCGTGCCGTAACGACCCGTGCGGCGAAGATG
AAGTTTGTTTAATTAATCAAGAATGTTTGAAAGAAGATGAAAACTCTATC
TATCCATGCCCAAAATATAAATGCGTCAAagGTTGTCCAGTCAATGTGAA
CAGTAAGTTGATCATACCGCTTGGTGAGATGGCCAAACTGCGAGATGGAG
AAAGTGATTGTTACCAAGTTTGCGAATGTCAGTATGCAAATGAACATAAC
GAGAAGTCAACAAAcacagttttcaaaaattgcaagaAATTCCTTTGTAA
TCAGAAACGAAGTTGTACGCGTGGTAAAATGACATACAGAGACGGAGACA
CATTCCATGAACAATGCAATACGTGCACGTGTATTGATGGCACGTTCGAA
TGCACCAAGAAAAATTGTGGACTGGAATTCGTAGAAGAAAGTACTGCCAC
GGGTCGTCATCGCAGACATCACGGTTCAAGTTTCTTCGTACAAAATTCGT
CACCTTGCAACTGCCACGATGTTTACAAACCGGTCTGTGCTTTAAATGTT
ATGACCTACCCGAACGCTTGTCTGGCAAAATGTTCAAATATCAGCGATAT
CAATCTCAGCGTTGGGGATTGCCGGTCTATTCATCCTTGTGATTTGAATT
CTTGTGATCCTGGCAAAGTTTGTGTCCCCTTTCGACGCGTGTGTCTGGCG
CCATGGACCAGTTGTCAACAATATGAATGTTCTTCACCAAGCACTACAGT
TCTGAGATACATGANGATTTGATGGATTTCAAAGTACGTTTAAAGGAATA
GTTTCATGTATTTCCCAAGAAGAGAAGTAAATGTTAAGAGCCTGT

Run BLAST on NCBI

transcript from alignment at sc0000026:362158..376831-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00003338 ID=TCONS_00003338|Name=TCONS_00003338|organism=Clytia hemisphaerica|type=transcript|length=14674bp|location=Sequence derived from alignment at sc0000026:362158..376831- (Clytia hemisphaerica)
ATCCCTTTGAAATCTCGTGCCTAAAAATGGTAGACATAGGTATGAGAAAG
AGACCTCATCCTACGTAATCAACTGCGTCTTAACTGTGACTATACCACTT
TTCTGTTTCGCGATCTCTATCAACATTCAAAAAAAAATGAGTTGATATGT
CAATGTTGATTCTATCAATATTTAGCCTCACTGTATCAAAACCTGTTGCC
AGTTTGTCGCCTCATTTTACTTTTTAAATGATGAAAAATAATACTTTTTT
ACTGCACTTTATGTAAATATTAGCTTTCATCTTTGAAGTAGTCTGATACC
CTTTTACATCCCCTTTATTTAGTATATTATTAATCACTATTTGACCAACA
GATTTTAAATTTTAATGAGACTTAATTATTTTGATGACCTTGGATTTTAA
TGACATTCTCTACTCCTCGAAATTTGAGTTTTTCATTTTCATCGAACAGT
TTATCAAAGAACTTATGTTGGTCATAACATAATTCGAAACCGTACCACAT
CGCCAAACTCAAAGTTTCTCTTAGAGTTGAGGAGTACATGAGTTTGTATA
CAGAATTATATTTATTGACGATCTTGACCTAAAAACTGCCAGCTCATTTA
TTAGAAGGTATAACAACAAGAATGTTATACAGGGTCACTTATAATTCAAA
TAGTTCTACTTTCGAGGAGGTACAATTCAGAGGGTCCTGGCAATAATCAT
GCTGATTTTTCGTTGTTTTTTTTCAACACAGCTGACCGTTCCAAATAACC
GAGAAAGCAAGGAGAAATTCACTCAACAATATGTCAAGAATCAATTAATG
GAAATTGCTCAACAATGTACTCAACCAGAGGTATGTTTTCAAATCAAAAA
GAATCTAGAAGCTGTCTTTTAAGTATTGTTGTTGTCCATGGGTGTGGTCG
CAACTATTGTCCAATTCTCCAAAAATGAAGTAATTTTTTCAACAAAATAA
ACTTCAAGGGCGATTCTTAACTATGGGATCTATATATAATTAGGCGGTAC
TGTATTAAAAAATCCAAAGAAGTACAAAGAAATTATGCAATAGGGAAGGA
AGGCGCCCGTTACGGATTTCTCTCGGGAAAATGGGAGATTGAACTTGATT
TCGTTGACGTTAGTTTTTTGAAAAAATAATTTTAATATCATTGGGTTTGT
TTTTTACTTTGCTAAATTTTTAGGCTGAATTTTGGAAATGCTTGGATAAA
TCCGCTCTCATGAAAGGTAAGTGCAAATTCTGTACTTTATAATAATCGTG
GCTCTTACGTTTCTGAATGAGTTTAATTAAGATCGGATAATTCATCAATG
TAGGTCTAAGTTTTTCATATCAAACTTAACGTCTTGTTAGGGGGGCTTGG
AAACTACCTTCTATAAGACCTAAGTGTTGCCTATAAGTGGTTATTACGAA
ATCAGAAAATATGTTTTGGAGATAAGAAAATGTCACGTATAAATTGTAAT
GATGTACATAGGTCGAAAGTGAAGAGAGATAAAAAGAAATATTCTTATAC
GATAGAATAGAGGAGTTTTTTCACTATACAACGAAATCATTTGNGATTCT
TATATGATAGAATAGAGGAGTTTTTTCACTATACAACGAAATCATTTGCT
ATTTTGCAATCTTGTTTTGTGCCAGTGTATCCCAACCCTAATGACGCACT
TGAAAATGCTAAGAGTGTATACTATGATTCAAGGCTTTCTTTAAAGGTGG
ATATACACTTTGAACGGAGTGTTTTTAAGTTTTTCAAGTATGTCAAGTAG
CTATACTATGTCGGTGGTTTTCTCACTTCGTTGTGGTCGAATAGATAAGA
ATTCAATATAAAAAAGAATGTTCGCTTTCCTAATTTTTCTCCGTATCTTT
CCTTACAGATTGTGTGTCACCTTTGATAAGTGTCTCTGCGGAGAAGCGTC
TGAGATAAGCTATCAAGTATATGAATTCTTACACTTGAGACTCCTCCTTT
GAGGTTTCTTCAGGTTTATGCGTCACTCCATTGAAGGTTAATAATACTCA
CCTTCTATAAAGGAGTCCTTATCCATCTCCAAAAGTGTGGTTTTAAAACT
TGACATACCTTTCTTGTTATTTTTGGTCTCTTTGNTTCTATAAAGAAGTC
CTTATCCATCTCCAAAAGTGTGGTTTTAAAACTTGACATACCTTTCTTGT
TATTTTTGGTCTCTTTGAAGTTCACCGGCTAAACATCTTAAAGATGTTGT
TTCAACGTATAGCCTTGAAATCCTCTTTTCTCTTCGTATGTTTGAGTGTA
GAATCAACCTTCATGTTTTGTGTTTGTTTATCTGTTTACATCTGCTTAAG
TTTTTGAAGTGCCAAATCCGGAATTTTTGAAACGGGAACTATTTTTGAAC
CCGATACCGTAAAATTATAAATGCGGGAAATCTCAATTTATTTAAATGAA
AATTTTTCTCCGGATAAGACACTACATATAGCAGGGTCATTTGATATTTT
TCCGGAATTTCCCTCTAGACCAGTCTAAACAAGAAGGTAATTAAAAACAT
ATTTATATTCACAATTTTGATACTAATGATGTTTTAGTTCCGACCCTAAA
ATATTCTCGAAAAGGCGAAAAAGGCAAAAAAAGATCGTCAATAGAGACAA
AAATTTGATATCAAATATTTAAAAAGAGGAGTGTCCATTGGGGCAAATTA
ATCTTTACAATATGGGAGGGCTCACAACGAGAAATCTTTTTTCGACCATC
AACTTAAGAAGTTGAAAATTCTTTCTCTTATCAATCAATCATAAGTTTTA
TGGATGAATAAAGGGGTTGGAATTTACAGATTTTTATTTGCAAGGTTTAC
TCCTCTAACGTGCACCCATGAAAAATATTAGAAAATATACGTCGAGAAGT
TATGTAGTACTCCAGTCAATAGTCATTCCTTTGAGCAAAATTGAACCTTT
TGAAAAATAAATTTTTCTAATTTTTCTTACAAAATGCACGAGGGGGTTAA
GATACACTTTTTTGGTATAGGAAGCTGTTAAAGAACACGATGCTCAACTT
TAACCAATCTTAAAACTTTACCATTTTGGAAAACCTAAGAAATGCTGATT
TAAACCATCTCCCTTAAATCAACCAAAAAGTAAGAAAAGTAACAATATGG
TTAATAAGAACTGTCGAGTGAATATTTTCTGCTTCTTATAAAAAAGGAGC
TGATCGTTTTGATCCAAATACGTCAAGCCTTTGGTGTTACTATTCTTTAG
TGAAGTCTATTTTCGAAAGAAATTCCATTACCTCAGATATATATGGTACA
TGAGGTTGTGTCAACGTCCATCAAACATTCACAACGTCCATGTAACGCCA
GATGAACGTTTTAGGTGTCAGCTAGGCAGACAACTCATATCGGATCTGTC
ACCACTTTTGATAAGTGTCTCTCGACCAAAATGGTAACAAAACACTTCTC
TAATCATCTGCATGATCATTTTCGTGTATACTTTACACCACTCCCCCTTT
TTCCTTTCGTGATCTGTCTACACGAATCTCATAATACATAAATTTCTGCT
TAAAAAAGGTTCACTAAACTTTCTGTATATAGGTTCGCTCAATTTTCCAT
AGGAACGTTTTTGTAGAGAATTCTCCAATTAGAAACCTGAATTTCCGGTG
CTGATCTCGCCTTATAGCATAACATCTTATAGAATTTGTGAAACATACTT
TTTCTAAAAGTAGAAGAAAGCTTTGGAAAGGACAATTTCGTAGGCCGACA
CAATATCTTGAAACACGATTATACAAATAAAAAAACGGGTCAAAATAAAA
TTGGCGAAATTATTGTATTATAGAGATTTTGCCGGTGGAAAATCTTAAAA
AGATCGGCCGGCAAAATTTATCCATTATTTTCTTACAAATTCAGTTAACC
CTTTCAATTCACCTGAGCACTTAAAAGTCCAAAAGTGGTGCCGAAATTGT
GGGTTAATTGTTTAATATTAGCACAACACCTCTCATCCTTGACCCCTTCT
CTTAAAAAGTGATTGCATGACAAGAATTAGAATTCCATGAAAGAGAGAGA
GGGAGAATTCTATCTATCTGTTCGCTTGATGAAGTGCAAAACGGAACGTT
ATCATCATGTTAATGATTTATGTGATGGGTGTCCTTAATCGATTTATTCA
ATTTTGTTCATCAATTCCATTGGTATTCATATTTCAAAATATCTTGCATA
CTGCGTTGGGCTTTTCAATCAAAATTTCCAAAATCAAATTATAATACATT
GTATATATCAGTTTGAAGGTCGGTACTCCGGGAGGAGGGGGGTAGCCAAA
AACCGGTACCTAGTATGACGAACGGTCCGGTTAAGTTTATGTCACCTTTC
TTAAGTGTCGTTACCGTTTCACCAAAATTTAGTCTCCCTAATGTTGGCCG
GTCCACACATTACCGGCATTCTTCAACTGTAGTACCCACGGATACTGCTA
CCACTCAACTCCCTCCCTCTCAGTGGTCAGTAGTTTTATCTTATCGGGTT
CTTTATTTTGGCGCCTTGACCGAATGCTTCTCTAGTTCTCACTCAACTGT
CTTTTTAGTAATATGAGTGACGTTAATTCGCTTGAATTAGTTTCCATTTT
AACTTTGTCACCTCATCAGTATAAAGCTGACAACTAACTTACGTTAAAAA
AATTATATGTTCAGAAATATTAGAATGTTGAATCATATTTTGGAAAAAAG
CAAACTTGCTTTTTGATTTTTCAAGAATTATGAAATTTGGAAATATTTTC
GTCAACGTTTAAAAAAAAGGCTACAATTTGAAATAAGATTTGCCTTGCAT
TCGTCATTTTTGAGGAAAATTGTATTCATCTATATTTTCCCCAACTCTAA
AAGAATTCAATTAGTAAAACCATCATTTAGTGTCGTGTGGAAATAAATGA
TAATTCACAATAAACCACAACTAACTATTAAACAAATGTGGTTTCATTAC
TGCATGATGGTCAAAACAAATCAATCTACTTTCCGATGATTGGCCTCAAT
TAAATGTCTCGATTGGTTGATTTAAGTGAAGAAATCTCGTTTCAAGTTTT
CGTGCTTTTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCTGT
GTGTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCACAAAAA
CTTTAGGGCAGCCTGTAGACTTCAAAAATGCTTGGCTTTGGCTGAAATTT
TGCACGCTTGTTCCTTGGGTGAATATCTGGGGGAGTTTTTTCTTTTTTTG
AAAATTTTGATTTTTGGGGTCTAGGGACGAGTTTTTCGCCAAACGAGGCT
AAACTTTGGGCAGCCTGGAGACTTCAAAAATGCTTGGCTTTGGCTGAAAT
TTTGCACGCTTGTTCCTTGGGTGAATATCTGGGGGAGTTTTTTCTTTTTT
TGAAAATTTTGATTTTTGGGGTCTAGGGACGAGTTTTTCGCCAAACGAGG
CTAAACTTTGGGCAGCCTGGAGACTTCAAAAATGCTTGGCTTTGGCTGAA
ATTTTGCACGCTTGTTCCTTGGGTGAATATCTGGGGGAGTTTTTTCTTTT
TTTGAAAATTTTGATTTTTGGGGTCTAGGGACGAGTTTTTCGCCAAACGA
GGCTAAACTTTGGGCAGCCTGGAGACTTCAAAAATGCTTGGCTTTGGCTG
AAATTTTGCACGCTTGTTCCTTGGGTGAATATCTGGGGGAGTTTTTTCTT
TTTTTGAAAATTTTGATTTTTGGGGTCTAGGGACGAGTTTTTCGCCAAAC
GAGGCTAAACTTTGGGCAGCCTGGAGACTTCAAAAATGCTTGGCTTTGGC
TGAAATTTTGCACGCTTGTTCCTTGGGTGAATATCTGGGGTTCTACAATT
GGGCCTATGAATGATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGC
ACGTTCGACTATTTTACATAGCAACGATTTAAAGTATCCAAATTTAAAGA
TTGATCGGGGCTCGAAATACAATTTATTTTCTCAAAGCGACATTTGACTT
TTAATGGATTTAGTGCCGTTAAAGTTGAGTGTGTGCCTAGTCCCAACTGG
CACGCAACGTTCTTTCAACGTTCGTCTAACGTTCGTTAGAGACGTCAAAA
GGACGTTGTTATGATGTTATATGCCAGTCCTTTTATTGGGTACAGCTAAA
TATTCTTTAAATATAAAGTGGATACACGTTTTTTATAAGAACACCCAAAA
ATAATCCCCATTTTGTGGGAATCTTTCTGCAATTTCTATGAAATTTGGTC
GTTTAGAGTTCATGAAGCCTTAAATCTTAGTTCTTAACTTGCTCTTAATA
TTTTGGACATCGAAGCCTTGTGTTCTTATAACTTTTGTTCTTATTAAAAA
ACTTCTTTTTAATCCCGATCAAGATCATGGGGTCGAAAGATAAATACTGA
TTTTGCTCGCTAGCAACTCATCTGTAAGCTCTGTCTGAAGAAGATCCGTG
ATTATTCCTACAAAAAGTCTCCACGCTGCGACCAGTCAGCTGGCGTACAG
GAAATGGGTAGAACATTAAATTATAATTTTGAAAATCATTATTTTTGTCA
TTGTACATACAATTATACTCATCCTACCAATCTTATTAAATTCTGAATTG
ACGTCAAGAGTCAGGGGTTTTGCTTAACTGCTTTCAAATAAAGAAAACTC
AAGTGCAGATATAATTGCAATAGGGGCTGCAAAATTTTCGCATTGATTAT
AAGTACCTCGCAATCAATCATCTCCCAAATCTAATTGGCTTACTCTCTAT
AATCCGATAGGGGTAAACTGATTTTAAAATCTGAAAGGGGTAAACTATAT
CATCTTCTCTTGAATTAGACTTAATTCAGGTTAATTATGGTTTTAGTATG
TTGTTTTTACTGTGTTGTGATATGTTTTGATTACCCATCANAGGTTAATT
ATGGTTTTAGTGTGTTGTTTTTACTGTGTTGTGATATGTTTTGATTACCC
ATCATGCTATGGGATTAATTTAACAACAGGTATTGTTGAAAAGGTATACC
CTACAGATCACGCAACTTATTTTTCATAAGGTCGTAACAGTACAAAGTAG
CCAAAAGTAGTAGATAATCTCTTCGAATGTAACGAAAATTGGAAAAACTT
TTGTCGTGGAATATAGCCGAAAACAAGACTCCGTTTTTTAGCCAGATTAT
TTGAAGTGATAGTTTAGGCAAAATACTGTATGACACAAATAATTTTCTTT
TCTGTGCGTGTAAAACTCTAACCGGAAAAATGTGTTGGATCCATTAATTG
AGGTAACTCGATATGCGTTGTCATGGATCAAATGTATAAATTTCCGTTCC
GTTCTCGTTTTAGATTTCCGGAAAAAGAAGCGGAAATACCATGGAACATG
TTGCAAAGAAGCCATACATACTTCATGCGAAGTGGAGTGTTTGACGACTA
AGAAGATCTCCAAATTGTTGAAAAATGAAAGATGTAATGCGAACAGAGAA
CCGAAATTCACAAGCTGTATCAAAAAAGTTCACGGTATGTTCTTCCTCTT
TCTCAGCTGCCTGCCTATACAACGCCCATGTATTGTCAAAACAACGCCCA
TATAAAGCTCAGCTCAGCGAATGTGTTGAAACGCCGTTGTCTGCCATTTG
TTGGTATAACTTTTGATTTTAGTGGATTTTTGAAATTATATTTCCGTTAC
GGGGCTCGAAATAACGGTCGGACATTTATTCCGACCCATCGTTATTTCAG
GCGCTGTCCATACCGTGTCCATACCGTGTTAGAATATTTGAAAAATTCTC
CCCGAAGCAAAATTTTCATCTTTTTCGAAAATAGAATCGTTTCATCTTAT
GGTTCGGACACTTGAAGAAAATCTGAATCTAATTGACAATCATTTATAAC
CCATTGATTCTGTTGCTTTTTTAATAGCTGCACGGAAATGCTGTAGCGGG
TCTACAAAAGAATGTAAACACTCGTGTATGCAGGTATGTCACTGGATATT
GATGAAACTCTTTTCCCCTTCCTTGTGCATACCCCTGAGAATAATCTTCT
AGAATTTCTATGTTGAATAAGGGAGTGGTCAGAAAGTATCTACTAGGGGG
GGTGGAGGATTCTAGGGGGGGGGGTTCCAAAATTTTTTCGAGGGTTTAGG
AAGGGGGTTCAAATTTTTTTTGAGGGTTTAGGGGGGGGTTCCAAATCTTT
TGGGCAACTCAAGAGAAAATGTAGGAAGTCTAATTTCATAGTTTTACGTT
TCAAGATTTCAAAAATTTTTCGGCCTGGCGGCCGACAACTCAGAATTTAT
TTTATTTGATATGTGTACATGTCATACTAACATTATTTGGGCATCATTGC
CTTTCCCTTTTGGTTTGTAGCATTGAGCTAAATGAGGGAAGTAGATTAGT
GGCTTTCACAGCTCATCAGAGTGGTTTGAAAAAGTACTTTTTAGAAAGAA
ATTTGTCAAACTCAAAACAAAGTGTCTTTTAGCTAAATGGTGGTGAAAAA
CATCGACATTTTCTCCCGTCGGCGCAAACCATGGTTGTGCCTCCTTAGTC
TCTACTAATATCTTATAAATTATATACACAGAGCTTTGACAGACCCTGGA
AAACCTGAAAATATAGGTTTATAGGGAAATTTCAAACTCAGAGAATTTTA
TTTTTCAGACACCTTTTAACAACAGAATAACTTGTATTTTAGGGTCTCGA
GTACCTGATCTTCAAAATTTTCTCCCTTCGGGGCCAACCATGGTGGCCCC
TCAGAATATTTTGAGTAATTGAGTAATGCCTCTGTAATGTAGGGAGATTA
TGTATCAGGGAAAATAAGCCGTAATTTTCTCCCAAATTTTGACATAAAAA
ACTGTCATACAAACAAATAATACTCTTTACCGCATCTGTATAGTCACATG
AATTTCTTTTAGACTCTAGTTATATTCCAAAACCTTAATTTCAAATATCA
CCTAACAGTGGAACCTCCTTAAATCGAATGTCTCCTTAATTCGAACATGC
TGTCTGGTACTCGATGTAGAAATTTTCTTCCGACACGCTAAAGCTCTGAA
GGTCGGGAAAATTTTAACGTCTGGAACCTTTGGGTTACCATTTTTCTTTT
TTTCTGTAAGGTTTCTCAGGCAGCAGAGATTTTCATGCTAAATTCAGTCG
GGTGCAGCAAAAAGTGTAAGGACAGTTAGACACGAGTGTGATGCGGTACA
TCAAACGATGACTATAGGTCGCCGATGGTATATTGGTCCGCTCCTTCAGA
GCTTTAGCGTGGGCGGCCGCCAATACGCCATCAGAATATCAGATAAGTCT
GGGCTTTTCAATAAACATTGCCGAGCAAGTCTCTAATAATTCGAAAAATA
TTGCGAGAGTTGGCGTTATCGAAACTATGTATCCTGCCAGAACCCGCAAA
GGTTAGAATCTGTGAACGAAAACTAACATCATTAATTAATTTCAACTCGT
TTATTTATCTATAGTATTTCAAGAACGTACGTTCGAACAATGTCCTTCAG
TTGAAACAGATTTTTCAAAAGAAATGTGGACGTCGATCAAAACAGTTCAA
ATGCGCTTTAACCAACTCCAACTTTGATCGTGCCATTCAGAATGTTAACA
ACTGTTGCAATCATAGCCATAATAAACGATGCCATAATTCGTGTAATAGG
GTGAGTATTTTGTTTTCCCACCGCTGACCTTAATAAACTAAGCTATATCC
GCCATCTTTGATCGGAATTTTCTGCCTCCTGGGTTTACATAAAGCTCAAT
ATCTTCATCACATTATCGGGGCGGAGTGAGGGATGTAGTGGAACATATTT
TGGTAAGGTCTTATCTCAAAATTGACGGGATAAAGAAATGAACTTTTGAT
TGTATGAGTCCAAACACGAAACCCTCCAGATATAAATGGGAATGCTATAT
TTAGTTAAAGGTTCCCAGGCCGGGTGCCTCTAGGACTCCCAAAGAAGACC
TGTTGAATCCTTAGCTAAATGAAACATTCATAATTATATATTTATGTTGA
GTTGAAGAATGATCGGATAATTTATGAAAATGCTTATTTTTCGTCATCTT
TAGGTATTAGGTAATTTGGACAAAGATTTCAAAACAGCATTCAAACAACT
AACAGATGATTGTGGTGAACTACACGTTAACGTAAGATTCATATCCAGAA
CAACCCCAGCCCTGTTTTTTCAATTACCTTGCTAAACGAATACCCCGAAG
TTTCAAAAAGTTTAAACTGCATCGTATCGTATTTCAGTTGAATCTCGATA
CTACAGATAATTAGTACCTTTCATTGGTCCCTTTGGTTAAAATATTACTT
ATTGGGATTCGACTGTATTTGACCGGTAGAAATGATAAGATATTTCAATA
TTCTCTTTTCTCATAGTTGACAGGTTTCTCGAAGAAAATTAATGGCTAAG
ATATTTCAATATTCTCTTTTCTCATAGTTGACAGGTTTCTCGAAGAAAAT
TAATGGCTAAGATATTTCAATATTCTCTTTTCTCATAGTTGACAGGTTTC
TCGAAGAAAATTAATGGCTAAGATATTTCAATATTCTCTTTTCTCATAGT
TGACAGGTTTCTCGAAGAAAATTGATGGCTAAGATATTTCAATATTCTCT
TTTCTCGTAGTCACCATTGTACAGGTGTTTATTGGATGCTAACACACAAA
CACAGAGGATCGAAGATGTACCAAACCGTGGACGAACAACAATCCGTAAA
CCAGGTGAAAATAACTAACAATAATAAAGACTAATATTTTGTATGGCTGG
CCATGATTAACGACTGAGGTTTTCTAGACAACTCAGTCTATTGTCTCCCG
CAGGGCCACTTCAAAAGTAAAAGAGTTAATAAATTAATTAAACAGGAAAA
ATCATTCCCCTAATATCAAAATATTCCTTACGGTACTGCACTGAACTACT
TCGTAGAATTAGTTTTATAAATACTAATATCGGTGATTTTTTCTTGTTCA
TTCAGCTTACCAATCGTTCAAACAACAATGTTGCGATCGTGCTGTGTCTC
CCGATTGTCGTAAGTGGTGCCAAGAAACGATGGCTGATCCTAAACTCATG
TTGTCGTTATGGGGCACCATGTATCTTTCTTGTATACAAAGTCCAAAAGA
AGTAGCGTTGTCCAACTGTATGACTGATGGTAAGATTATATTCGAAATAC
TTTTCATTTGATATGAAATCATGTTCGGATTTTACCCAGAGATTTAAGCT
ATTGTTGACACAAAAGTAAAGAATTTGTTCGAATTATCAAACTAAATATA
GGTTGTTCTCAACTAAATTCTTAAATTCTTCTATCAATTTTCTAATCTGT
AGTTCTAAATAATTCAGGATCCTTAAACTAAATTTACTCTTCTCATTTAA
TACATAGTTTTCGAGCCATGCGAAATCGGCGTTAAAGAGCCAATGACCTT
TTGCACTAACCTGAACGAACATCCTATGTCTTTGTTCCGGCGTGGAGACC
AGTCCGGTGATTTGACCGCCCGGAAGTTGCATAAATTCTGGTCAGACGGA
GTTGTGAAAGTCTTTGGTTACAAGCTTGTGTTCAAAGATATTTCGACCTG
TCAACCAGAGATGTTTAAAGCAATGGCTTGTCTCCTGGCAACCAAACCAT
GCGATCACAGACATTCTCAGATACAAGTGTGCAGGTGAGATTTTGACAAA
AAAAGGTTTTTAACTTTACATAGACGTGTTAACAATGTGGTAATTAACTA
GTAGAAATTTCCATCCTCATTAGTGTTTGACTTCTGGCTAATTTTCTGAT
GGGGTAATAATACAACTTTATTATTAATATTAAAACAGCATTAAAGTAGT
GCTATAAACTTTACAGTAGAAAATCAATTTAAGAATGCTTAATGTAGGAG
CATAATACAATTAAGAAAATCAAAGAAAAGCAGCAAAATAGGTGTCAAAT
TTTGATTTTGCCCAAATAACATAATCTCTTTCACCATGATTAAAATCTTT
GAAAATTCTTAAATAATCAGAAAATCTTACTTGTAAAATGATAACCTCAT
TTTCAATCCAATTTCAGACATGACTGTGAAATCCTACTGACGGAATGTTT
GAATCACGATATTTCCGATTACGCTCCGAACACAGTTCAAGATATTTGCG
CCAACATCTTACCAAATAATAACCAATCAAATTGCATCCCGTTACGTAAA
TACGCCGTAAGACAGACCCCGTCAACGGCTCTATTAAGGCGCGTTAAGCC
GAGAGAAGATGTGACGTTACCGTGCCGTAACGACCCGTGCGGCGAAGATG
AAGTTTGTTTAATTAATCAAGAATGTTTGAAAGAAGATGAAAACTCTATC
TATCCATGCCCAAAATATAAATGCGTCAAAGGTAAAAATCCTTTTTTTTA
ACCATGTAAACTTAAGCTTAATAACAAGAGTAGCTTTGACTTTGAAAACT
CTACACAAACTTTTAGTTACAGACTTGGACATCTATCTTTATATTTTAAC
TGGAATCGTTAATAATAAGTGCATTTATGATACATGGAATACAGTAATAT
GGGTGTTATATGATAGTATGGTAATTATTACGGGATATCAACTAAAATTT
GTCCCTTTACTTTTCCTATGTATGAACTAACCGTCTAGCATGCTACTTTA
AATTGGACTTGTTCATTTTTAGGTTGTCCAGTCAATGTGAACAGTAAGTT
GATCATACCGCTTGGTGAGATGGCCAAACTGCGAGATGGAGAAAGTGATT
GTTACCAAGTTTGCGAATGTCAGTATGCAAATGAACATAACGAGAAGTCA
ACAAACACAGTTTTCAAAAATTGCAAGAAATTCCTTTGTAATCAGAAACG
AAGTTGTACGCGTGGTAAAATGACATACAGTAAGTACAATTATTTCAAAT
GCTTCATAAAGAGTGGTTTGATTAGAACTTTGAACATCTCATAAAGTTAT
CCCGATAATTGTCTCATTTTCTCGGGTGATATATCACATTTCCCCGACAA
CGATTTGGACATTCGTGATCTTTTATTTTTCCGGATAATGATTCCAGTTT
ACCCTATTCTTCTTTCATCTTCCCCGATAATGACTTTGGTTTGGTTTCAC
GATTTTCGATCATTTTTCTCAAATAGTAATCACAGTTTTCCCGATTTTAC
TCATAGGAGACGGAGACACATTCCATGAACAATGCAATACGTGCACGTGT
ATTGATGGCACGTTCGAATGCACCAAGAAAAATTGTGGACTGGAATTCGT
AGAAGAAAGTACTGCCACGGGTAAGAAACTGTGTGTGTTCTCCCAGCTGA
CATTCAACGTTGTTTCAACGTTTATCTAATGTTCACAACGTCCATATAAC
GTTGGATGAACGTCGAAACAACGTTGTTTGCCAGCTGACTACGTCTAAAT
GTTGTCTCCGAAATCTCTAGATACAGTTGATGCTCTCTAATTTGACTTTC
AAGGCGGATTGGATTTTCATCGAATAATAGAGTGTGTAGAATAGTAGAAC
GTCGAATCAAGGATCGTCAACTGTATTGTTTTTGTGAAAATTAAATTTTC
TTTATCTTGACGTTTCAATGTCTTGTCAAAGGGAGTAAAAGCAAATTTTG
ACATCTTTGGTGCTTTTTTCTTGACATTAGAGGTCTTAAGGGTAATGGAT
AGATGTAGTTATGTCTCAAACGAAACCCTTTCTTGGTGTCGTTAATATAA
TCTTTTCAATACTCTTCTTTCAGGTCGTCATCGCAGACATCACGGTTCAA
GTTTCTTCGTACAAAGTATGTGCTAGTTACCCATCACTTCTTCACTAACA
TGTCCTTTTACTCCAAGTGATAGATACGGTGATTTTATCCAACAGGCAAA
CGATGTTTTTTAACGTTCATACAATGTTTTAAATAGACGTTTTTTGACGT
TTCTTGCAAGTTAGATATCTACTCTCGGGTACCTAATAGCCGGCCGGGGG
GATTGGAATAAGCGGGGTGGGGGTTGGAAAAAATCTCAAAAATTAATAAG
CGGGAGTGCTGGAATAAAAATGTCCTGGGTAGAAATTTTTGAAAAGGGGG
CTAATACAACAGAATTAGGACAAAAGAGGGAACTTTCAAAAACATTTTCC
CAAAAATTATCAAGCGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTAGGTACCCGAGAGT
ATACTCTTTAGATGAAGGTTATAAGTTATATAGTTTCCACCGTTATAGAA
TCAAACAAACGTTCGATTTGCGTAAGGAGTCGCCTCTACAGATTCGAATG
TTTGCTTCCATAGTTAAATTACGTAACTCAACAAAATATGAAAAGCCTCA
ATCTGTTTTCGATCTATTTACAGATTCGTCACCTTGCAACTGCCACGATG
TTTACAAACCGGTCTGTGCTTTAAATGTTATGACCTACCCGAACGCTTGT
CTGGCAAAATGTTCAAATATCAGCGATATCAATCTCAGCGTTGGGGATTG
CCGGTCTATTCATCCTTGTGATTTGAATTCTTGTGATCCTGGCAAAGTTT
GTGTCCCCTTTCGACGCGTGTGTCTGGCGCCATGGACCAGTTGTCAACAA
TATGAATGTTCTTCACCAAGCACTACAGTTCTGAGATACATGANGATTTG
ATGGATTTCAAAGTACGTTTAAAGGAATAGTTTCATGTATTTCCCAAGAA
GAGAAGTAAATGTTAAGAGCCTGT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001848	XLOC_001848	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000026	supercontig	sc0000026:362158..376831 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.34435	1.6119	2.06462	2.16126e-10	0	8.62926e-05	8.87486e-09	6.89889e-09	0	0	0	1.07601e-07	0	2.59441	2.04159	0.34174	0.000173898	0.0014498	0	3.79789e-10	6.00835	6.15037	1.56357	0.0312241	2.33518e-10	1.86461e-10	6.17761	7.5708e-08	0.0569131	0.228194

Blast

[Close]

BLAST of TCONS_00003338 vs. Swiss-Prot (Human)
Match: RECK (Reversion-inducing cysteine-rich protein with Kazal motifs OS=Homo sapiens GN=RECK PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.421e-76
Identity = 201/701 (28.67%), Postives = 313/701 (44.65%), Query Frame = 1

Query:   79 TQQYVKNQLMEIAQQCTQPEAEFWKCLDKSALMKDFRKKKRKYHGTCCKEAIHTSCEVEC---LTTKKISKLLKNERCNANREPKFTSCIKKVHAARKCCS--GSTKECKHSCMQYFKNVRSNNVLQLKQIFQKKCGRRSKQFKCALTNSNFDRAIQNVNN---CCNHSHNKRCHNSCNRVLGNLDKDFKTAFKQLTDDCGELHV-NSPLYRCLLDANTQTQRIEDVPNRGRTTIRKPA--YQSFKQQCCDRAVSPDCRKWCQETMADPKLMLSLWGTMYLSCIQSPKEVALSNCMTDVFEPCEIGVKEPMTFCTNLNEHPMSLFRRGDQSGDLTARKLHKFWSDGVVKVFGYKLVFKDISTCQPEMFKAMACLLATKPCDHRHSQIQVCRHDCEILLTECLNHDISDYAPNTVQDICANILPNNNQSNCIPLRKYAVRQTPSTALLRRVKPREDVTLPCRNDPCGEDEVCLINQE-CLKEDENSIYPCPKYKCVKGCPVNVNSKLIIPLGEMAKLRD--GESDCYQVCECQYANEHNEKSTNTVFKNCKKFLC-NQKRSCTRGKMTYRDGDTFHEQCNTCTCIDGTFECTKKNCGLEFVEESTATGRHRRHHGSSFFVQNSSPCNCHDVYKPVCALNVMTYPNACLAKCSNISDINLSVGDCRSIHPCDLNSCDPGKVCVPFRRVCLAPWT--SCQQYEC 2130
            ++  +K+ L      C +   E W C++ S+L   F+K        CC+ AI   C   C    +   ISK+ + E  NA       SCI +      CCS  G    C+  C   F+   S    Q+K + +  C   S Q    + N      ++N  +   CC+ + +  C N+C R+L +   + +     L + C    +   PL++C L+++          + G T    P+      K  CC +A +  CR+ C +  +        W      C  +P EV++  C+ DV EPC++G +  +T+CTN N  P  LFR  +   D  A    K W  G +K+    +   DI  CQPEM+KA+AC L  KPC  +     +C+ DC  +L +C + +      +T + IC  + P ++  NCIPL  Y    T    +       E+VT PC  +PC  +E+C +N++ C   D     PC  Y CV+GC +   S  I+  G + ++    GE  CY++C C           + + +NC +  C + ++SC  G      G +F   CN C+C  G   C+ + C    + E ++    R   G         PCNC D + PVC  N  TYP+AC+A+C  + D     G C S  PC+ N C   + C+P  +VCL  +    C QYEC
Sbjct:   59 SESRLKHLLQRAPDYCPETMVEIWNCMN-SSLPGVFKKSDGWVGLGCCELAIALECRQACKQASSKNDISKVCRKEYENA-----LFSCISRNEMGSVCCSYAGHHTNCREYCQAIFRTDSSPGPSQIKAV-ENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIV-DGLIEGCKTQPLPQDPLWQCFLESSQSV-------HPGVTVHPPPSTGLDGAKLHCCSKANTSTCRELCTKLYSMSWGNTQSWQEFDRFCEYNPVEVSMLTCLADVREPCQLGCRN-LTYCTNFNNRPTELFRSCNAQSDQGAMNDMKLWEKGSIKMPFINIPVLDIKKCQPEMWKAIACSLQIKPCHSKSRGSIICKSDCVEILKKCGDQN-KFPEDHTAESICELLSPTDDLKNCIPLDTYLRPSTLGNIV-------EEVTHPCNPNPCPANELCEVNRKGCPSGD-----PCLPYFCVQGCKLGEASDFIVRQGTLIQVPSSAGEVGCYKICSC---------GQSGLLENCMEMHCIDLQKSCIVGGKRKSHGTSFSIDCNVCSCFAGNLVCSTRLC----LSEHSSEDDRRTFTG--------LPCNCADQFVPVCGQNGRTYPSACIARCVGLQDHQFEFGSCMSKDPCNPNPCQKNQRCIPKPQVCLTTFDKFGCSQYEC 709

The following BLAST results are available for this feature:

BLAST of TCONS_00003338 vs. Swiss-Prot (Human)

BLAST of TCONS_00003338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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POSITION

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Match Name	E-value	Identity	Description
RECK	2.421e-76	28.67	Reversion-inducing cysteine-rich protein with Kaza...	[more]

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TCONS_00003338 (transcript) - C. hemisphaerica

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