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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003197 ID=TCONS_00003197|Name=TCONS_00003197|organism=Clytia hemisphaerica|type=transcript|length=667bp
atgaaaataatcattttgagtaattttgaaGTGTATTTAATACTACAGGT
TTCCCTTTATTTAAGCTGTTTAAAATCTACAagtaaaataacattttcta
ttggaaaataaaatctaaaaggtAATTTGAAATTGATTAAAATAGTTTGA
GTATATAATTATGATGGCAAAATTcgaaaatacaaatttttagTCGAAAC
AAATTTTTAGTCGAAGGGAATATTGATCTCGTAAATTCTAAGTCATTATC
AGCTCAAatattcaatcctttttgcACAATCTTCAGATTTTTCCGATCAT
GAGATCCGTTAGACCTTGtcagaataaaaatattttatattgaTCGTAAT
ATATTCTGATGTTGTAATCGTTCCATTACATTCGGTTTCTCAGTTAGGCC
AGTTCCAGCCATTATGAAAGAAAACTTCCGAGTTGCGTAAAAATaatcgt
tttttcaaaatttgtatttttccaTAATGGCATAATGGTTGACTTTTATT
TTGAGAGCAAAGGCTATAACCTCTTCTACTTCAATAGTTCTCCACTTATT
TGCTGGAATGGCTTCATCCATTGCTTTTAAAGCTTACAGTCCGAATCATT
AACAGCTTTCTCGTAAACAATTTTCTCAAGCATCAGCCATCTCCATCCCA
GTATTGGTCTTGCTACT Run BLAST on NCBI transcript from alignment at sc0000025:595864..598759- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003197 ID=TCONS_00003197|Name=TCONS_00003197|organism=Clytia hemisphaerica|type=transcript|length=2896bp|location=Sequence derived from alignment at sc0000025:595864..598759- (Clytia hemisphaerica)
ATGAAAATAATCATTTTGAGTAATTTTGAAGTGTATTTAATACTACAGGT
TTCCCTTTATTTAAGCTGTTTAAAATCTACAAGTAAAATAACATTTTCTA
TTGGAAAATAAAATCTAAAAGGTAATTTGAAATTGATTAAAATAGTTTGA
GTATATAATTATGATGGCAAAATTCGAAAATACAAATTTTTAGTCGAAAC
AAATTTTTAGTCGAAGGGAATATTGATCTCGTAAATTCTAAGTCATTATC
AGCTCAAATATTCAATCCTTTTTGCACAATCTTCAGATTTTTCCGATCAT
GAGATCCGTTAGACCTTGTCAGAATAAAAATATTTTATATTGATCGTAAT
ATATTCTGATGTTGTAATCGTTCCATTACATTCGGTTTCTCAGTTAGGCC
AGTTTCAGCCATTACGAAAGAAAACTTCCGAGTTGCGTAAAAATAATCGT
TTTTCAAAATTTGAATTTTCCATAATGGCATAATGGTTGACTTTTGTTTT
GAGAGCAAAGGCTATAACCTCTTGTACTTCAATAGTTCTCCACTTATTTG
CTGGAATGGCTTCATCCATTGCCTTTAAAGCTTACAGTCCGAATCATTAA
CAGCTTTCTCGTAAACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGT
ATTGGTCTTGCTACTTTCGACACCACCCATCACTTTCCTATTGAATTTCT
TGATCTGTTTCAAAATCTTTGGTTGTAGAAAGATGTAACAAAGTGGATCT
GATATAATGTTCAAAACATTGACACCGATAAGTCCTACGATAACCAACAA
TCGGTCTTCCCCTAACTCCACATGGTTCACAATGATACTTGGTACATAAT
TGAACAAGAAAAAAGTCATAACAATAGCAAAAGGGAGAGCAAATTTACGT
AACATCCTGTACCGGTTGTTGGTTGACCCAGTATTGTTACCACCGTGTGC
CAACCGAGAAGTGTACAGGACTTTGCNCTGCTTTTCGAACCAATCGTTTT
ACTAACATTATATGTACCTCCAAATAAATGAAAATAATCATTTTGAGTAA
TTTTGAAGTGTATTTAATACTACAGGTTTCCCTTTATTTAAGCTGTTTAA
AATCTACAAGTAAAATAACATTTTCTATTGGAAAATAAAATCTAAAAGGT
AATTTGAAATTGATTAAAATAGTTTGAGTATATAATTATGATGGCAAAAT
TCGAAAATACAAATTTTTAGTCGAAACAAATTTTTAGTCGAAGGGAATAT
TGATCTCGTAAATTCTAAGTCATTATCAGCTCAAATATTCAATCCTTTTT
GCACAATCTTCAGATTTTTCCGATCATGAGATCCGTTAGACCTTGTCAGA
ATAAAAATATTTTATATTGATCGTAATATATTCTGATGTTGTAATCGTTC
CATTACATTCGGTTTCTCAGTTAGGCCAGTTTCAGCCATTACGAAAGAAA
ACTTCCGAGTTGCGTAAAAATAATCGTTTTTCAAAATTTGAATTTTCCAT
AATGGCATAATGGTTGACTTTTGTTTTGAGAGCAAAGGCTATAACCTCTT
GTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTCATCCATTGCC
TTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTAAACAATTTTC
TCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTACTTTCGACAC
CACCCATCACTTTCCTATTGAATTTCTTGATCTGTTTCAAAATCTTTGGT
TGTAGAAAGATGTAACAAAGTGGATCTGATATAATGTTCAAAACATTGAC
ACCGATAAGTCCTACGATAACCAACAATCGGTCTTCCCCTAACTCCACAT
GGTTCACAATGATACTTGGTACATAATTGAACAAGAAAAAAGTCATAACA
ATAGCAAAAGGGAGAGCAAATTTACGTAACATCCTGTACCGGTTGTTGGT
TGACCCAGTATTGTTACCACCGTGTGCCAACCGAGAAGTGTACAGGACTT
TGCAGATGATAAACACATATGCCACCGTAGCGTAACAAGTTGTGAATCCG
TTAAAAACGTGATGCGAGTAGTTGTTGTACGGTGCTCGCTCTGTAGATGT
GGTGTGTTTTAATACCACGCCTGTTGATATAGCGCCACACCATATAAATC
CAATGGCAACATAACTAGCTATTGTTGGGATGTATTTACGATATTTCAAC
TCCAATATGACATACAGCAATCTATCTGTTGTCAGTAAAACCAAGTTAAT
AATATAAGCTACATAAGCAGCTTGATAAGTTACCAAAAAGTCTAAGGAGA
AACCGACATCATAGCCAAAGATGGCTACTGACCATGCATTTGTGGCAATG
TTGAAGAATGAAACCAGATTCAAATGGATCAGTAGGATGGACTGGTTTGA
CAGAATCTTCATCTTGAGTGTACTGATCTGTAGTACCATTGCCAGTAGAT
TCAGCAACATTGCAATGACCATTAATGCTATGTCGAGAACAGCCACAATG
GAGATTGCACCAGCATTGGTATGAAGATGTTGTGTAGCATTTGAATGATT
CGAATGTGCCATTATCGTTNCGATCATAATATATTGTGATGTTGTAATCG
TCCCATTACATTCGGTTTCTAGTTAGGCCAGTTCCAGCCATTATGAAAGA
AAACTTCCGAGTTGCGTAAAAATAATCGTTTTTTCAAAATTTGTATTTTT
CCATAATGGCATAATGGTTGACTTTTATTTTGAGAGCAAAGGCTATAACC
TCTTCTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTCATCCAT
TGCTTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTAAACAAT
TTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003197-exon-sc0000025-1575043694:598363..598759 | TCONS_00003197-exon-sc0000025-1575043694:598363..598759 | Clytia hemisphaerica | exon |
| TCONS_00003197-exon-sc0000025-1575043694:595864..596133 | TCONS_00003197-exon-sc0000025-1575043694:595864..596133 | Clytia hemisphaerica | exon |
| TCONS_00003197-exon-sc0000025-1510915933:598363..598759 | TCONS_00003197-exon-sc0000025-1510915933:598363..598759 | Clytia hemisphaerica | exon |
| TCONS_00003197-exon-sc0000025-1510915933:595864..596133 | TCONS_00003197-exon-sc0000025-1510915933:595864..596133 | Clytia hemisphaerica | exon |
| TCONS_00003197-exon-sc0000025-1491911889:598363..598759 | TCONS_00003197-exon-sc0000025-1491911889:598363..598759 | Clytia hemisphaerica | exon |
| TCONS_00003197-exon-sc0000025-1491911889:595864..596133 | TCONS_00003197-exon-sc0000025-1491911889:595864..596133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:595864..598759 - |
Blast
The following BLAST results are available for this feature:
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