TCONS_00073820-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073820-protein
Unique NameTCONS_00073820-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2420

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073820-protein ID=TCONS_00073820-protein|Name=TCONS_00073820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2420bp
MSQNYMNYFNSGASTGMSGVSGNNANNNTNASSGMGGDFGGNNQANFLGG
NMSLSGGSFMDMINSAPPPMMNTPAQQPQQAQPQQQQMPRYNHPTAYNNM
YGQSNFGGGGGMENSAMRLQQFANRQMTPRHGFDMGNQMNQEQMNQYYMQ
MRKMRMMQEYGSQARFNNPNMQQHSWPRNMMSNMPPHLQQMSSGQSRMMQ
NPNFPSEMNNPQTRMQNLSNQQYQQAGAFRKMPVLDEAPPSLRGPSPFSP
QQAQQQQPQQQPSQANASFNPQFKAQNLNQQQQQQPGNTMNQLNANEMSN
PLSTNENLNVQKMMQQQPGQLRSPLPQQNTQQKPQQQHPSTQPQIQQPLT
PQIQQPVTPLQQPATPIQQPPTPQLQQPPTPQPQTPQPLTPQPLTPQPQQ
QAQPQQTQIPISQQQGANPISTFLNNFNTDPNSSLNVPQSPKLTHFGAPS
SVSSASSFDQPPEAAATSPSSNLTQVTQTLAYASPPSISSQNAQPSPTVK
PIPSPIVSSAQNIPPLQTQPMGNPSSNAAIYFKSLAQIQQQINILKQSPQ
TPEVGHQIQMLNHRYAMIFKQYEASKQQMPPFLEQMPNRPNRNAPPMVNQ
PQNLSSPRFRQQHPQQLQQMRQQGPLSPRLPQNQRLQSPLPQLSQTQMAL
RQQQQQFMQQRQQQFMQQSQQQTFSSPLSVQQTRMQGALQQQPQPQQQPP
PHQQPPQSNQLQQMRSPQPNFNQTPMQNQQIPPNSQPQHTSSQPQIQTPQ
QPKPQDQAKPSEISNAGLLEDSLDGINIPEFESFEKALTEDSKTDSLFSS
AFLAGTDLFPSTSLFDGDPLESFTNKQDDLKKVNENTITPVKQVENDSKS
YQELSSSTTVLSSGNQGQQPAPNQNMQSMFGNNSFNLPITNQLNNKPVQQ
QAPAKQENFLPFPFNQNQFHAGPQIPPNIMMSMTNFMSQTISSMPSSSMN
NINQMPGKPLSLPGMAPPAVDNTKQETMPKTKGKGKGSKAKAGGTKKKKD
PTAPKGKAGRPPGSLNKKKREEKQKKIVEMEFDDFDALPPDELLGKEFDD
PNMRRSLRERQKTTNYKDDFDYNISDDEGKKKAEQVEQEKEPKEQPEVKE
DESLAPPVASNPVEPVIDGGVNQLVAYQPNLEVEGEIAIIEKILAMRTVQ
QEPGEEKTGKTEKTEDPENANKTEEKSEDISEEKVEESETKSKEQEETMV
EEYYVKYKGYSYLHCEWGTLEYLAKKDKRVPAKIKRYKQKRDSSYAYLNE
LDDEPFNPDYVEIDRVLDYTTTVDPVTNDTIDHYLVKWRGLPYEDSTWEL
KMNIDESVIQNFHEMKKPPPVEQRRFKPRPQEGDWVKELQSPMYKNGNRL
HDYQLEGMNWLTFCWYKRINCILADEMGLGKTIQSISLLCAMKKYGIRGP
FLVIAPLSTIGNWQREFETWTDINAIVYHGSAVSRNNIQQYEMYYKDEKG
NSINDVYKFEAIITTYEIVLSANQFLCTIPFRCLIIDEAHRLKNQKCKLM
EGLNNLKMEHRVLLTGTPLQNNVEELFSLLNFLEPTRFPSQGAFMFEFGN
LKTEGQVEKLKQILKPMMLRRVKADVQTNIASKEETIVEVELTTIQKKFY
RAILERNFSFLAKGSGYSNLPNLMNTMMELRKCCNHPFLIKGAREKISSD
YSDPEQPDKQLTHLSGLIESSGKMVLIDKLLPKLKSGGHKILVFSQMIKV
LDLIQEYLMEKQYQFERIDGGVQGNMRQAAIDRFCRPDSDRFVFLLCTRA
GGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQEKPVKVYRLICRN
TYEREMFDRASLKLGLDKAVLGNMNQKEASGQKAMSKKEVEDLLKKGAYG
AVMENDEDASNFCEEDIDQILQRRTQVIQIEGEGKGSTFSKASFVSDKAG
LDVDIDDPDFWKKWAQKASIKLEDLEQDKQLIMAEPRKRKQTKRFGNIDG
DALEMSDLDSDDEVYEPNKSKSKSSQYIERTAWTRVECFKVEKLLLIYGW
DRWQDITSQVQFKQEVRNNDVEGISRTILAYCFRFYKTDEKSKDFFTNLI
DESVKNAPPKNEKFDITDQILGSAPPPKNGRGRKRNATTNPGRNALRRLT
HQYSKPALIECGLDWLTVDPDTLIIDSSYRKHLQQHCHKIMSRIRLIHSL
KHDIIKEASVDIFEGKPHEEIEFTVPPAEGGELPAVWWDEKADKSLLIGT
YKHGYEKYQQIRNDPCLYFYHKIGPYQMDEKAPETPESIVNPASVERCED
GASDTESVTSKKKSKPSSSATKAGENENDSMNESEDENDLFSSHNASPAS
VASNKETPPSTVPDAKQVQSNNPDTRWPQPNDLNMRLRRMFTSFLRFTDK
EQLDILKAEKDKQKQVRLANMVQERQRKRAEMQQRWTRREESDFYKVLTN
FGVIQNPETKEYXRFLQSSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045843XLOC_045843Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073820TCONS_00073820Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR000953Chromo/chromo_shadow_dom
IPR001650Helicase_C
IPR000330SNF2_N
IPR023780Chromo_domain
IPR016197Chromodomain-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1915..1935
NoneNo IPR availableGENE3D2.40.50.40coord: 1139..1240
e-value: 3.7E-14
score: 51.9
NoneNo IPR availableGENE3D3.40.50.10810coord: 1351..1572
e-value: 2.1E-50
score: 170.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1659..1824
e-value: 2.4E-35
score: 120.8
NoneNo IPR availableGENE3D2.40.50.40coord: 1249..1317
e-value: 3.7E-15
score: 54.9
NoneNo IPR availableCDDcd00024CHROMOcoord: 1182..1240
e-value: 4.94623E-8
score: 51.4959
NoneNo IPR availableCDDcd00046DEXDccoord: 1370..1518
e-value: 1.13336E-20
score: 90.8596
NoneNo IPR availableCDDcd00079HELICccoord: 1670..1794
e-value: 4.3032E-28
score: 111.946
NoneNo IPR availableCDDcd00024CHROMOcoord: 1262..1314
e-value: 4.26725E-6
score: 45.7179
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1346..1547
e-value: 2.7E-32
score: 123.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1362..1536
score: 19.928
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 1136..1242
e-value: 2.7E-11
score: 53.5
coord: 1259..1317
e-value: 1.4E-9
score: 47.8
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 1180..1249
score: 9.336
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 1261..1327
score: 9.824
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1702..1786
e-value: 5.6E-24
score: 95.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1674..1786
e-value: 2.8E-19
score: 69.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1676..1827
score: 18.964
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1368..1639
e-value: 3.2E-59
score: 200.3
IPR023780Chromo domainPFAMPF00385Chromocoord: 1262..1314
e-value: 3.3E-11
score: 42.8
coord: 1183..1240
e-value: 6.9E-7
score: 29.0
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 1134..1168
coord: 1198..1239
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1573..1870
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1279..1318
coord: 1349..1571

Blast
BLAST of TCONS_00073820-protein vs. Swiss-Prot (Human)
Match: CHD8 (Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5)

HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 627/1221 (51.35%), Postives = 833/1221 (68.22%), Query Frame = 0
Query: 1198 TMVEEYYVKYKGYSYLHCEWGTLEYLAKKDKRVPAKIKRYKQKRDSSYAYLNELDDEPFNPDYVEIDRVLDYTTTVDPVTNDTIDHYLVKWRGLPYEDSTWELKMNIDESVIQNFHEMKKPPPVEQRRFKPRPQEGDWVKELQSPMYKNGNRLHDYQLEGMNWLTFCWYKRINCILADEMGLGKTIQSISLLCAMKKYGIRGPFLVIAPLSTIGNWQREFETWTDINAIVYHGSAVSRNNIQQYEMYYKDEKGNSINDVYKFEAIITTYEIVLSANQFLCTIPFRCLIIDEAHRLKNQKCKLMEGLNNLKMEHRVLLTGTPLQNNVEELFSLLNFLEPTRFPSQGAFMFEFGNLKTEGQVEKLKQILKPMMLRRVKADVQTNIASKEETIVEVELTTIQKKFYRAILERNFSFLAKGSGYSNLPNLMNTMMELRKCCNHPFLIKGAREKISSDYSDPEQPDKQLTHLSGLIESSGKMVLIDKLLPKLKSGGHKILVFSQMIKVLDLIQEYLMEKQYQFERIDGGVQGNMRQAAIDRFCRPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQEKPVKVYRLICRNTYEREMFDRASLKLGLDKAVLGNMNQKEA--SGQKAMSKKEVEDLLKKGAYGAVMENDEDASNFCEEDIDQILQRRTQVIQIEGEGKGSTFSKASFVSDKAGLDVDIDDPDFWKKWAQKASIKLEDLEQDKQLIMAEPRKRKQTKRFGNI-DGDALEMSDLDSDDEVYEPNKSKSKSSQYIERTAWTRVECFKVEKLLLIYGWDRWQDITSQVQFKQEVRNNDVEGISRTILAYCFRFYKTDEKSKDFFTNLIDESVKNAPPKNEKF-DITDQILGSAPPPKNGRGRKRNATTNPGRNALRRLTHQYSKPALIECGLDWL-TVDPDTLIIDSSYRKHLQQHCHKIMSRIRLIHSLKHDIIKEASVDIFEGKPHEEIEFTVPPAEGGELPAVWWDEKADKSLLIGTYKHGYEKYQQIRNDPCLYFYHKIGPYQMDEKAPETPESIV-NPASVERCEDGASDTESVTSKKKSKPSSSATKAGENENDSMNESEDENDLFSSHNASPASVASNKETPPSTVPDAKQVQSNNPDTRWPQPNDLNMRLRRMFTSFLRFTDKEQLDILKAEKDKQKQVRLANMVQERQRKRAEMQQRWTRREESDFYKVLTNFGVIQNPETKEY 2412
            T  EE++VKYK YSYLHCEW T+  L +KDKR+  K+KR+K K      + +E D+EPFNPDYVE+DR+LD + ++D    + + +YLVKW  LPYEDSTWELK ++DE  I+ F  ++   P E +R   RPQ   W K   S  YKN N+L +YQLEG+NWL F WY R NCILADEMGLGKTIQSI+ L  +   GI GPFLVIAPLSTI NW+REF TWT++N IVYHGS  SR  IQQYEMY KD +G  I   YKF+A+ITT+E++LS    L  I +RC+IIDEAHRLKN+ CKL++ L ++ +EH+VLLTGTPLQN VEELFSLL+FLEP++FPS+  F+ +FG+LKTE QV+KL+ ILKPMMLRR+K DV+ N+A K+ETI+EVELT IQKK+YRAILE+NFSFL+KG+G++N+PNL+NTMMELRKCCNHP+LI GA EKI +++ +         HL  ++ S+GK+VLIDKLLPKLK+GGHK+L+FSQM++ LD++++YL++++Y +ERIDG V+GN+RQAAIDRF +PDSDRFVFLLCTRAGGLGINLTAADT IIFDSDWNPQNDLQAQARCHRIGQ K VKVYRLI RN+YEREMFD+ASLKLGLDKAVL +M+ ++   +G +  SKKE+EDLL+KGAY A+ME D++ S FCEEDIDQIL RRT  I IE EGKGSTF+KASFV+ +   D+ +DDP+FW+KWA+KA + ++ L     L++  PR RKQT+ F  + D D +E SDL+S+D+       + +S ++    A+ R +CF+VEK LL+YGW RW+DI S  +FK+ +   DVE I R IL YC   Y+ DE  K F  +LI      +P +N K  ++ +    S P P   RGRK       G+    + T    K        DW+   +PDTL  D SY+KHL+  C+K++ R+R+++ L+ ++I + +  +  G    EI+   P  +  E+P  WWD +ADKSLLIG +KHGYEKY  +R DP L F  K G  + D+KA      ++ N + +    D   D E      + KP     K  ++E D +   ++E  +                       D  QV        WP  + L  RLRR+ T++ R   +EQ+ I  AE+  +++ R     + ++  R E QQRWTRRE++DFY+V++ FGV  +P+T ++
Sbjct:  663 TEAEEFFVKYKNYSYLHCEWATISQL-EKDKRIHQKLKRFKTKMAQMRHFFHE-DEEPFNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHP-ELKRVN-RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDD------ERPRSRRHDRHHAYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIKGFIWDLI------SPAENGKTKELQNHSGLSIPVP---RGRK-------GKKVKSQSTFDIHKA-------DWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAG--RPDDKAIAAEHRVLDNFSDIVEGVDFDKDCED----PEYKPLQGPPKDQDDEGDPLMMMDEEISVIDG--------------------DEAQVTQQPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQF 1824          
The following BLAST results are available for this feature:
BLAST of TCONS_00073820-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHD80.000e+051.35Chromodomain-helicase-DNA-binding protein 8 OS=Hom... [more]
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