TCONS_00071216-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071216-protein
Unique NameTCONS_00071216-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length707

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071216-protein ID=TCONS_00071216-protein|Name=TCONS_00071216-protein|organism=Clytia hemisphaerica|type=polypeptide|length=707bp
MVEIMENIDEVHLSSDSEDEVVDKKTKKKQHKKLMKDIETLSGATKKRSK
KTKRTEPTPEISEHAWTTGQDRTNKVNLSDLVGCLKTDTKKIASMKNQLR
TMEKSKQVLEKPLHKPEQQRVERRVAYDETKKDISKWDETVRKNRDAETL
NFPLQSYQAPKQTISTISTNFKPQNDLEREIAEVLKGSQHLLERKDKELT
EHEEEALKNFDLQEALERRKELQKMRALQSYYEAKCRRQKKIKSKKYHRI
LKKEKQKALSNVDLEKLSKDDPEMFEKHLEKAEKMRAMERASLRHRNSSK
WAKNVITKGKQNKEDQERIREQLRISRELTNHKTVSDSEDENDIEEGMDT
QTPDQQETTLKLLTATSTEEGGSSNPWLLGGRSNSQGQDGEEMTEEDMLL
KRPKAIVTDESKQLKVLTGADDLEDERSSGEEWDIKEESSTVEEKKTKKK
KKKVPKKEKQPADIITQIKNSVYLKETESTTEYKNDNSSKVTETKKWNKQ
QQQKKQQTATMESDGIRFLKSDSDAVTIGSFTGNENNSGSDSDEDDVINE
QRMNIRDAFANDDVIEDFVQEKEAEIEKAKPKAVDNVLPGWGDWGGAGLK
VNTRKRKRFTKDPTKEKSRLDDGKANVIINETRNRKFAKHQVSDVPFPYT
NRTEFERSIRQPIGEHWNTPSSYEKLIQPRITTNSGTMIDPLKATKKIKK
KNKTIKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044271XLOC_044271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071216TCONS_00071216Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006709SSU_processome_Utp14
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
cellular_component GO:0032040 small-subunit processome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..546
IPR006709Small-subunit processome, Utp14PFAMPF04615Utp14coord: 16..694
e-value: 5.9E-144
score: 481.3

Blast
[Close]
BLAST of TCONS_00071216-protein vs. Swiss-Prot (Human)
Match: UT14A (U3 small nucleolar RNA-associated protein 14 homolog A OS=Homo sapiens GN=UTP14A PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.457e-41
Identity = 70/144 (48.61%), Postives = 96/144 (66.67%), Query Frame = 0 
Query:  551 QRMNIRDAFANDDVIEDFVQEKEAEIEKAKPKAVDNVLPGWGDWGGAGLKVNTRKRKRFTKDPTKEKSRLDDGKANVIINETRNRKFAKHQVSDVPFPYTNRTEFERSIRQPIGEHWNTPSSYEKLIQPRITTNSGTMIDPLKA 694
             R  I++AFA DDVI DF++EK   +E +KPK VD  LPGWG+WGG GLK + +KR+RF     +   R D    NVIINE RN   A HQV  +P+P+T+  +FER+I+ PIG  WNT  +++KL  P++ T  G +I+P+KA
Sbjct:  591 HRQMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPKVVTKPGHIINPIKA 734
The following BLAST results are available for this feature:
BLAST of TCONS_00071216-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UT14A6.457e-4148.61U3 small nucleolar RNA-associated protein 14 homol... [more]
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