TCONS_00067128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067128-protein
Unique NameTCONS_00067128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length380

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067128-protein ID=TCONS_00067128-protein|Name=TCONS_00067128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MSRRELKKEIEYLKTVFPKTQHVLRILSASTDDLTCSFTDNSGKKHTIIC
SITDSYPDFPPIWCSESEAPQLVEIVEKINAITSSNHLLFTMTKTLAIEL
FTMIKVEVPTSVLEATLVSDEKGVDEDYEMDEVDCDDEEENEIEDEDDDD
DPIDQECFDFREDPVNDESKEKDEVGEANYSQLQKLRGVQREEYLSGKVS
GSVQATDRLMKELKNIYKSDSFKKNLYTLELKEESNLYDWFVKLKGFDKE
SHLHKDLLKLFKSDSKTDHICLNLSYTSRFPMEPPFVRVCYPAITGGYVL
NGGAICMELLTPQGWSSAYSIEALIMQISATLVKGKARVDFSSTNRINTV
YSLNKAQQSYKTMVQIHEKSGWFTPPKDEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041945XLOC_041945Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067128TCONS_00067128Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 207..373
e-value: 2.9E-4
score: 24.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..176
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 271..365
e-value: 5.0E-7
score: 29.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 207..332
score: 11.857
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..114
e-value: 0.0069
score: 15.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 153..367
e-value: 1.9E-22
score: 79.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 202..337

Blast
[Close]
BLAST of TCONS_00067128-protein vs. Swiss-Prot (Human)
Match: UB2Q2 (Ubiquitin-conjugating enzyme E2 Q2 OS=Homo sapiens GN=UBE2Q2 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.855e-100
Identity = 170/390 (43.59%), Postives = 250/390 (64.10%), Query Frame = 0 
Query:    1 MSRRELKKEIEYLKTVFPKTQHVLRILSASTDDLTCSF-TDNSGKKH------TIICSITDSYPDFPPIWCSESEAPQLVEIVEKINAITSSNHLLFTMTKTLAIELFTMIKV--EVPTSVLEATLVSDEKGVDEDYEMDEVDCDDEEENEIEDEDDDDDPIDQECFDFRED-PVNDESKEKDEVGEANYSQLQKLRGVQREEYLSGKVSGSVQATDRLMKELKNIYKSDSFKKNLYTLELKEESNLYDWFVKLKGFDKESHLHKDLLKLFKSDSKTDHICLNLSYTSRFPMEPPFVRVCYPAITGGYVLNGGAICMELLTPQGWSSAYSIEALIMQISATLVKGKARVDFSSTNRINTVYSLNKAQQSYKTMVQIHEKSGWFTPPKDEG 380
            MS   LK E+++L ++F K     RI+S   D+L C F     G  H      T+ C+IT+SYP   PIW  +SE P L  ++E++   T +N+LL    K L  EL ++  +   +   +L+  L + + G  E+   +E + ++E   +IED D          ++ +E+ P++ +  E + + + N + L+K+R  QR+++L+G VSGSVQA+DRLMKEL++IY+S S+K  +Y++EL  +S LYDW VKL+  D +S LH DL ++ K     ++I LN S+   FP +PPFVRV  P ++GGYVL GGA+CMELLT QGWSSAYSIE++IMQI+ATLVKGKARV F +       Y+L +AQQSY ++VQIHEK+GW+TPPK++G
Sbjct:    1 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNITESYPSSSPIWFVDSEDPNLTSVLERLED-TKNNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDH---------YEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDS-LYDWHVKLQKVDPDSPLHSDL-QILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGAN---KNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 375
The following BLAST results are available for this feature:
BLAST of TCONS_00067128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2Q26.855e-10043.59Ubiquitin-conjugating enzyme E2 Q2 OS=Homo sapiens... [more]
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