TCONS_00065815-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065815-protein
Unique NameTCONS_00065815-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065815-protein ID=TCONS_00065815-protein|Name=TCONS_00065815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
LHKECSKCTKNIQRCSTFGSNHRNHQATDIQALKQKQNARIESSKQQVRR
FSTSGNNMPPKIFNRFNTFESQQRRFKSTTTTTLPKSGVVTKNARRSVST
GENSKATAALMEKDIYYDVPPVEVPSHIQATIFKGKNKPPVLETVSMPTI
QQETDIIVKVLKTTICGTDLHILGGNVFTATEGRRLGHEGIGEIVETGSQ
VQNFQVGDRVLVACITNCGECQHCQNKFYGHCEDGGWRLGNTIDGMQGQY
ARIPHADTSCHYVPPHVHDTEMEDALVMCSDILPTGLEVGLLDGALKQNE
NIAIIGAGPVGLAALTCAVGMFNPQNSIVVDVNDFRLDVAKDIGASHIIN
NKNGDATEKILEITEGKGVDLVVEAIGIPEGWYMCQDSVKSGGRIAMLGV
HGVPATINLEKMWYRNFTFTAGMMHGFTIPSLMSAILEGKLNAEPLITHR
LYLSDVQNAYTMFKDAGQYEAMKIMLINDLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041230XLOC_041230Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065815TCONS_00065815Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR002328ADH_Zn_CS
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 135..476
e-value: 0.0033
score: -135.3
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 154..256
e-value: 9.1E-25
score: 86.6
NoneNo IPR availableGENE3D3.40.50.10730coord: 301..462
e-value: 2.6E-23
score: 82.3
NoneNo IPR availableGENE3D3.90.180.10coord: 125..300
e-value: 3.0E-36
score: 124.0
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 309..426
e-value: 1.1E-20
score: 73.8
IPR002328Alcohol dehydrogenase, zinc-type, conserved sitePROSITEPS00059ADH_ZINCcoord: 187..201
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 129..287
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 276..433

Blast
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BLAST of TCONS_00065815-protein vs. Swiss-Prot (Human)
Match: ADH6 (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.398e-19
Identity = 92/368 (25.00%), Postives = 150/368 (40.76%), Query Frame = 0 
Query:  129 QATIFKGKNKPPVLETVSMPTIQQETDIIVKVLKTTICGTDLHILGGNVFTATEGRRLGHEGIGEIVETGSQVQNFQVGDRVLVACITNCGECQHCQNKFYGHC-----------EDGGWRLGNTIDGMQGQYARIPHADTSCHYVPPHVHDTEMEDA--------LVMCSDILPTGLEVGLLDGALKQNENIAIIGAGPVGLAALTCAVGMFNPQNSIVVDVNDFRLDVAKDIGASHIINNKN--GDATEKILEITEGKGVDLVVEAIG----IPEGWYMCQDSVKSGGRIAMLGVHGVPATINLE---KMWYRNFTFTAGMMHGFT----IPSLMSAILEGKLNAEPLITHRLYLSDVQNAYTMFK 464
            +A I      P  +E V +    +  ++ +KV+ T +CGT++ +LG           LGHEG G +   G  V   + GD+V+   +  CGEC  C N     C            DG  R   T  G         +  T C Y           DA        L+ C     TG    +    +      A+ G G VGL+ +            I VDVN  +   A+++GA+  +N ++      E + ++T+  G+D   EAIG    +      C +S    G   ++GV  +PA++ L+   ++++   +    +  G+     IP L++  +  KLN +PLITH L L  +  A  + K
Sbjct:   11 KAAILWKPGAPFSIEEVEVAP-PKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQLMSDGTSRF--TCKGK--SIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCG--FSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVM-GCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFDMTDA-GIDFCFEAIGNLDVLAAALASCNESY---GVCVVVGV--LPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMK 364
The following BLAST results are available for this feature:
BLAST of TCONS_00065815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADH61.398e-1925.00Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
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