TCONS_00064553-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064553-protein
Unique NameTCONS_00064553-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length376

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064553-protein ID=TCONS_00064553-protein|Name=TCONS_00064553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
MADDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS
FTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVIT
IGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASL
STFQQMWISKQEYDESGPSIVHRKCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040487XLOC_040487Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064553TCONS_00064553Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR020902Actin/actin-like_CS
IPR004001Actin_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 62..84
score: 94.91
coord: 50..61
score: 92.79
coord: 116..129
score: 97.31
coord: 27..36
score: 96.55
coord: 141..160
score: 96.3
coord: 237..253
score: 91.95
IPR004000Actin familySMARTSM00268actin_3coord: 6..376
e-value: 1.6E-242
score: 821.6
IPR004000Actin familyPFAMPF00022Actincoord: 4..376
e-value: 1.5E-151
score: 504.6
NoneNo IPR availableGENE3D3.30.420.40coord: 1..165
e-value: 1.5E-83
score: 278.1
NoneNo IPR availableGENE3D3.90.640.10coord: 198..255
e-value: 4.3E-37
score: 125.5
NoneNo IPR availableGENE3D3.30.420.40coord: 256..374
e-value: 5.9E-41
score: 139.2
NoneNo IPR availableGENE3D3.30.420.40coord: 166..197
e-value: 1.3E-14
score: 53.2
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 9..182
e-value: 6.07631E-20
score: 84.5627
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 4..154
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 148..376
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 105..117
IPR004001Actin, conserved sitePROSITEPS00432ACTINS_2coord: 357..365
IPR004001Actin, conserved sitePROSITEPS00406ACTINS_1coord: 54..64

Blast
[Close]
BLAST of TCONS_00064553-protein vs. Swiss-Prot (Human)
Match: ACTB (Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1)

HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0
Identity = 360/374 (96.26%), Postives = 370/374 (98.93%), Query Frame = 0 
Query:    3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            DDD+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GMES GIHETT+NSIMKCDVDIRKDLYANTVLSGGTTM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of TCONS_00064553-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACTB0.000e+096.26Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 ... [more]
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