TCONS_00064442-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064442-protein
Unique Name	TCONS_00064442-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	823

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064442-protein ID=TCONS_00064442-protein|Name=TCONS_00064442-protein|organism=Clytia hemisphaerica|type=polypeptide|length=823bp
RKKKINLKELSSRKVHRDIDIKMPKQNEMELLTDDEDENCDPDELLQEVK
SLKRKLKSKENEIECHKETVKNLSQKNKLYCEKIEVANEKHAQEMKICKE
TTEFKLEEKLKLYSSMQQYIVLQENQMHEIQQEKGEDVLFNVSNSVNMFV
KQIDELQERLVKFNDENCHLKALCEEKEQKFSKLQQDMKTKYVPKLDYDL
LSKEKDIISKNRLTPLKESKNISNIKYDLLTEQVNSFKQKQKELDGENRS
LRKKVRDLETECTRLRFAPPKLHIQEKAYEGVEENLSQVEEENIQLHSQI
RDMSFEHKKKEHELESKCQSLENQLSDLRKEQDERQEECRDIITDIREMR
SKLDKEKRKNEELQRKIKSNEELHQLSLQQMQSHEKILHDKLEAKYSHRM
STLETKYNAIMNLVESFKNIPKILTQIRNEKCQLDEDLKNFNRRVATSLE
GFKQQVLAAVNETNTRSNILAVRYKKEIELRKKLHNELVDLKGNIRVFCR
VRPVIKEDGDDDEQAVTFGDDPDNDDALWVQNKSSNKHFQMDRVFQPNAS
QTEVFEDVEWLVTSCLDGFNVCIFAYGQTGSGKTFTMEGTKENPGINQRA
LKQLFQCSNEMRDWNFTILVSFVEIYNEMLRDLLSVEPTTKLTIKQGKDG
NYVPDLTHVKVNNVRDVNEVFALGRANRSTACTDMNERSSRSHSVLTINV
IGENINTGTRVNGKLNLVDLAGSERVSKSGSDGIRMKEAQCINKSLSALG
DVIHALKNKSKHVPYRNSKLTYLLHDSLGGDSKTLMVVQVSPVVKNVGET
ICSLNFAQRVRQVELGTATRKVK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040411	XLOC_040411	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064442	TCONS_00064442	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR019821	Kinesin_motor_CS
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 272..299
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	COILS	Coil	Coil	coord: 311..338
None	No IPR available	COILS	Coil	Coil	coord: 234..261
None	No IPR available	COILS	Coil	Coil	coord: 42..90
None	No IPR available	COILS	Coil	Coil	coord: 346..373
None	No IPR available	GENE3D	1.20.5.170		coord: 232..268 e-value: 4.7E-4 score: 19.8
None	No IPR available	GENE3D	1.20.5.50		coord: 275..377 e-value: 7.9E-4 score: 18.6
None	No IPR available	CDD	cd01366	KISc_C_terminal	coord: 492..815 e-value: 1.95655E-175 score: 510.598
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 763..784 score: 65.11 coord: 683..700 score: 57.08 coord: 714..732 score: 63.9 coord: 568..589 score: 74.51
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 492..821 e-value: 3.7E-159 score: 544.7
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 487..823 e-value: 2.1E-124 score: 414.3
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 500..813 e-value: 1.2E-109 score: 366.2
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 494..813 score: 113.196
IPR019821	Kinesin motor domain, conserved site	PROSITE	PS00411	KINESIN_MOTOR_1	coord: 713..724
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 455..813

Blast

[Close]

BLAST of TCONS_00064442-protein vs. Swiss-Prot (Human)
Match: KIFC3 (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4)

HSP 1 Score: 463.381 bits (1191), Expect = 4.745e-151
Identity = 270/640 (42.19%), Postives = 378/640 (59.06%), Query Frame = 0

Query:  247 ENRSLRKKVRDLETECTRLRFAPPKL-----HIQEKAYEGVEENLSQVEEENIQLHSQIRDMSFEHKKKEHELESKCQSLENQLSDLRKEQDERQEECRDIITDIREMRSK---------------------LDKEKRKNEELQRKIKSNEEL-----------HQLS---------------------LQQMQSHEKILHDKLEAKYSHRMSTLETKYNAIMNLVESFKNIPKILTQIRNEKCQLDEDLKNFNRRVATSLEGFKQQVLAAVNETNTRSNILAVRYKKEIELRKKLHNELVDLKGNIRVFCRVRPVIKEDGDDDEQ--AVTFGDDPDNDDALWVQNKSSNKHFQMDRVFQPNASQTEVFEDVEWLVTSCLDGFNVCIFAYGQTGSGKTFTMEGTKENPGINQRALKQLF-QCSNEMRDWNFTILVSFVEIYNEMLRDLLSVEPTTKLTIKQGKDGN---YVPDLTHVKVNNVRDVNEVFALGRANRSTACTDMNERSSRSHSVLTINVIGENINTGTRVNGKLNLVDLAGSERVSKSGSDGIRMKEAQCINKSLSALGDVIHALKNKSKHVPYRNSKLTYLLHDSLGGDSKTLMVVQVSPVVKNVGETICSLNFAQRVRQVELGTATRKV 822
            EN  LR+++R  E E   LR  P        H QE A   + + LSQ++ E  +    + +++ E ++K   L      L++ L++  +E++      RD    I  +R++                     L + + +N+ LQ ++    ++           HQL+                     L++MQS E+  +  +E  ++     ++  +  +  +  +   +   L  + N+   L   ++ F   +  +L   K ++  A+ E N+ +  L  +Y++E++LRKK HNELV LKGNIRV  RVRPV KEDG+  E   AVTF  D D+D  + + +K     F++D+VF P ASQ +VF++V+ LVTSC+DGFNVCIFAYGQTG+GKT+TMEGT ENPGINQRAL+ LF +   +  DW +TI VS  EIYNE+LRDLL  EP  KL I+   DG+   YVP LT  +V +V D+N+VF  G  NR+T  T++NE SSRSH++L + V G + +TG R  GKLNLVDLAGSERV KSG++G R++EAQ INKSLSALGDVI AL+++  HVP+RNSKLTYLL DSL GDSKTLMVVQVSPV KN  ET+ SL FA+RVR VELG   R+ 
Sbjct:  142 ENERLRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQ--LRDKLSQLQLEMAESKGMLSELNLEVQQKTDRLAEVELRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEVESSKTKQALSESQARNQHLQEQVAMQRQVLKEMEQQLQSSHQLTARLRAQIAMYESELERAHGQMLEEMQSLEEDKNRAIEEAFARAQVEMKAVHENLAGVRTNLLTLQPALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRKKCHNELVRLKGNIRVIARVRPVTKEDGEGPEATNAVTF--DADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLRRA 777

The following BLAST results are available for this feature:

BLAST of TCONS_00064442-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064442-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIFC3	4.745e-151	42.19	Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC...	[more]

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TCONS_00064442-protein (polypeptide) - C. hemisphaerica