TCONS_00064315-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064315-protein
Unique NameTCONS_00064315-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064315-protein ID=TCONS_00064315-protein|Name=TCONS_00064315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
CTHQKFKTAELERRNWKEKGLGGKMMFIIVTCRSLLWFLSTIGTFMAVLS
ATFYPRWLISENKTYYNKKLNKTYEYNDRIGIYNKCQFSRRLKKVFCRPY
ASELTEVTSIAWQCALFFLGVSLLLLGIACIFAIISFCKQIIKRKSLMNL
AGILQTFAGLFMIVVCILYPLGWDNDNIKDICHNENQKASKFNMGNCSMG
LSFFCAIGGMAGCFFCAMFSFVADKAVFSAKVQDEILEGKRLICVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040321XLOC_040321Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064315TCONS_00064315Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019372Lipome_HGMIC_fus_partner-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019372Lipoma HMGIC fusion partner-like proteinPFAMPF10242L_HMGIC_fplcoord: 33..220
e-value: 1.8E-42
score: 145.5
NoneNo IPR availableGENE3D1.20.1250.20coord: 21..223
e-value: 3.4E-5
score: 23.1

Blast
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BLAST of TCONS_00064315-protein vs. Swiss-Prot (Human)
Match: LHPL2 (Lipoma HMGIC fusion partner-like 2 protein OS=Homo sapiens GN=LHFPL2 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.130e-38
Identity = 86/231 (37.23%), Postives = 121/231 (52.38%), Query Frame = 0 
Query:   25 MMFIIVTCRSLLWFLSTIGTFMAVLSATFYPRWLISENKT-----YYNKKLNKTYEYNDRIGIYNKCQFSRRL----KKVFCRPYASELTEVTSIAWQCALFFLGVSLLLLGIACIFAIISFCKQIIKRKSLMNLAGILQTFAGLFMIVVCILYPLGWDNDNIKDICHNENQKASKFNMGNCSMGLSFFCAIGGMAGCFFCAMFSFVADKAVFSAKVQDEILEGKRLICVF 246
            M  +IVTCRS+LW L +I    A L A     WLI + ++                Y+  +GIY +C  +  +    +   C PYA    E+ S  WQ    FL V + +L +  + ++ + C Q I +KS+ N+ G+LQ  AGLF+I+  ILYP GW      D C      AS +  G+CS+G +F+ AIGG    F CA+FS  A+ A  S KVQ+EI EGK LIC+ 
Sbjct:    1 MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYC---GHYASAYKPGDCSLGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNLICLL 228
The following BLAST results are available for this feature:
BLAST of TCONS_00064315-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LHPL21.130e-3837.23Lipoma HMGIC fusion partner-like 2 protein OS=Homo... [more]
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