Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00063937-protein ID=TCONS_00063937-protein|Name=TCONS_00063937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp MHSLHFFIFAVVFSNTCGFQPPEFEKCDVEDDKHWFCKKGLQYFDNFCDQ DESKTACKQTCNLCNGPPTPPPVPEPICGVSKVSQSRVVNGEDAPEGAYP WIASLQIRVAIENVKSHFCGGTLIHPKWVLTAAHCFDFGNFSMNAIMPFV HVELGIHDQDKEESTSQLRNIKNAFESPDLGVKDGTLYGDLLLLELDVPV MLNDRVNLPCLPDKEEYPTIGQSCVVAGWGIREYPSEKTGGILQQTRLPV VGPNHIGCHSNTEVICVGHGFGTQANGKQHPNACKGDSGGPLVCQQPNGS WKFVGVASYVHTYCKYYTAYAPVGKYLPWIKEHVPL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0004252 serine-type endopeptidase activity
Vocabulary: Biological Process
Term Definition
GO:0006508 proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006508
proteolysis
molecular_function
GO:0004252
serine-type endopeptidase activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Score = 64.42 Score = 32.3 Score = 64.39 Expect = 1.1E-54 / Score = 197.7 Expect = 7.8E-44 / Score = 150.0 Score = 28.073 Expect = 6.72766E-53 / Score = 175.157 Expect = 4.0E-19 / Score = 67.9 Expect = 1.4E-20 / Score = 72.6 Expect = 5.2E-29 / Score = 100.7 Score = Score = Score = Sequence PR00722 SM00020 PF00089 PS50240 cd00190 G3DSA:2.40.10.10 G3DSA:2.40.10.10 G3DSA:2.40.10.10 PS00135 PS00134 SSF50494
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001314 Peptidase S1A, chymotrypsin family PRINTS PR00722 CHYMOTRYPSIN coord: 186..200 score: 32.3 coord: 120..135 score: 64.42 coord: 281..293 score: 64.39
IPR001254 Serine proteases, trypsin domain SMART SM00020 trypsin_2 coord: 87..330 e-value: 1.1E-54 score: 197.7
IPR001254 Serine proteases, trypsin domain PFAM PF00089 Trypsin coord: 88..330 e-value: 7.8E-44 score: 150.0
IPR001254 Serine proteases, trypsin domain PROSITE PS50240 TRYPSIN_DOM coord: 88..335 score: 28.073
IPR001254 Serine proteases, trypsin domain CDD cd00190 Tryp_SPc coord: 88..333 e-value: 6.72766E-53 score: 175.157
None No IPR available GENE3D 2.40.10.10 coord: 123..195 e-value: 4.0E-19 score: 67.9
None No IPR available GENE3D 2.40.10.10 coord: 88..122 e-value: 1.4E-20 score: 72.6
None No IPR available GENE3D 2.40.10.10 coord: 196..335 e-value: 5.2E-29 score: 100.7
IPR033116 Serine proteases, trypsin family, serine active site PROSITE PS00135 TRYPSIN_SER coord: 282..293
IPR018114 Serine proteases, trypsin family, histidine active site PROSITE PS00134 TRYPSIN_HIS coord: 130..135
IPR009003 Peptidase S1, PA clan SUPERFAMILY 50494 Trypsin-like serine proteases coord: 61..334
Blast
BLAST of TCONS_00063937-protein vs. Swiss-Prot (Human)
Match:
CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)
HSP 1 Score: 140.969 bits (354), Expect = 7.200e-40
Identity = 90/253 (35.57%), Postives = 129/253 (50.99%), Query Frame = 0
Query: 86 SRVVNGEDAPEGAYPWIASLQIRVAIENVKSHFCGGTLIHPKWVLTAAHCFDFGNFSMNAIMPFVHVELGIHDQDKEESTSQLRNIKNAFESPDLGVKDGTLYGDLLLLELDVPVMLNDRVNLPCLPDKEEYPTIGQSCVVAGWGIREYPSEKTGGILQQTRLPVVG----PNHIGCHSNTEVICVGHGFGTQANGKQHPNACKGDSGGPLVCQQPNGSWKFVGVASYVHTYCKYYT--AYAPVGKYLPWIKE 332
SR+VNGEDA G++PW SLQ + HFCGG+LI WV+TAAHC G + + ++ G DQ +E Q+ I F++P + T+ D+ LL+L P + V+ CLP ++ G C GWG +Y + KT LQQ LP++ G +IC G A+G ++C GDSGGPLVCQ+ +G+W VG+ S+ C T YA V K +PW+++
Sbjct: 32 SRIVNGEDAVPGSWPWQVSLQDKTGF-----HFCGGSLISEDWVVTAAHC---GVRTSDVVVA------GEFDQGSDEENIQVLKIAKVFKNPKFSIL--TVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMICAG------ASG---VSSCMGDSGGPLVCQK-DGAWTLVGIVSWGSRTCSTTTPAVYARVAKLIPWVQK 258
The following BLAST results are available for this feature:
BLAST of TCONS_00063937-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M H S L H F F I F A V V F S N T C G F Q P P E F E K C D V E D D K H W F C K K G L Q Y F D N F C D Q D E S K T A C K Q T C N L C N G P P T P P P V P E P I C G V S K V S Q S R V V N G E D A P E G A Y P W I A S L Q I R V A I E N V K S H F C G G T L I H P K W V L T A A H C F D F G N F S M N A I M P F V H V E L G I H D Q D K E E S T S Q L R N I K N A F E S P D L G V K D G T L Y G D L L L L E L D V P V M L N D R V N L P C L P D K E E Y P T I G Q S C V V A G W G I R E Y P S E K T G G I L Q Q T R L P V V G P N H I G C H S N T E V I C V G H G F G T Q A N G K Q H P N A C K G D S G G P L V C Q Q P N G S W K F V G V A S Y V H T Y C K Y Y T A Y A P V G K Y L P W I K E H V P L 50 100 150 200 250 300 Expect = 7.20e-40 / Id = 35.57 Sequence CTRB2
Match Name E-value Identity Description
CTRB2 7.200e-40 35.57 Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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