TCONS_00054611-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054611-protein
Unique Name	TCONS_00054611-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	853

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054611-protein ID=TCONS_00054611-protein|Name=TCONS_00054611-protein|organism=Clytia hemisphaerica|type=polypeptide|length=853bp
NYNRLMMEVSFSGVTFSSNFDSGNLARVEQVKPEDVKVPAETPDFIESPD
LEFNLWTSPDAAGTPYENGNRTWFYFSVRGGSLPNKTLRFNIMNLNRQSR
LYSQGLNPFFRVSHGKHSSWQQVKDRCTYETVDGNFQISFLHSFTDVTRM
STTYFAFCYPYSYTECQQYMNSLEEKYVQDEDKNSQDTDIYFHRETLVTS
NDGLKVDLLTVSSMKGITENREKTLLGLYPDREKERARIFNNKKIVFLTS
RVHPGETPASFVFNGFLDFILRENDDRSIALRNSFVFKMVPMLNPDGVKR
GHYRTDIFGVNLNRTYQNPDAFRQPSIFAIKTLMMYHHFNRIDPKLCTTD
LQQSASQQAIPTAPKGDLLARKSSTDPNLTSETALELHKRLKEVAFSSCE
TINEASDECTSMKEQVQEKQGKPLDPDTHVGYDDMNSPMKGTKELNLNKN
NPDNGVFIYIDLHGHASKRGCFIYGNHFTRESEMVDCMLLPKLISVNSLH
FDFQACNFTEKNMYHKDKKDGLSKEGSGRVSMFKALGIIHSYTLECNYNT
GRATNPISPATLDQGRATPPPQPGFPPRYTPEHYEEVGRGTAVAILDLIN
RNPWSRLPTSEYKSLNGVRDWLSKHIKNNTKVLSQQTKVNLKKKNGAGKS
SISTMKDSKSTIPSTMFNPFKQHSNDSVTIKYSLSKDEKSKTFQDKPEID
HNNNNSDGKTSSPKTSSKTVHRSRTTCSEKSEKRHERSKKKEPKTASKTI
VDGKERSPKKRSQSSLTELEEITKKALKAKRHSLPLPTTKTTTPPRKVKA
ASNNPSSKLKGNCLKTRTASKNQQESVSLKDVYHNGVSVSKEKAKTTKVS
RRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034414	XLOC_034414	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054611	TCONS_00054611	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000834	Peptidase_M14
IPR034286	M14_AGBL5-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004181	metallocarboxypeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis
GO:0035608	protein deglutamylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035608	protein deglutamylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 402..422
None	No IPR available	GENE3D	3.40.630.10		coord: 149..581 e-value: 2.4E-82 score: 275.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..672
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 688..832
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..379
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 458..558 coord: 153..343
IPR000834	Peptidase M14, carboxypeptidase A	PFAM	PF00246	Peptidase_M14	coord: 195..317 e-value: 2.3E-10 score: 40.7
IPR034286	Cytosolic carboxypeptidase-like protein 5 catalytic domain	CDD	cd06236	M14_AGBL5_like	coord: 180..597 e-value: 1.09525E-148 score: 441.821

Blast

[Close]

BLAST of TCONS_00054611-protein vs. Swiss-Prot (Human)
Match: CBPC5 (Cytosolic carboxypeptidase-like protein 5 OS=Homo sapiens GN=AGBL5 PE=1 SV=1)

HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0
Identity = 319/656 (48.63%), Postives = 420/656 (64.02%), Query Frame = 0

Query:    7 MEVSFSGVTFSSNFDSGNLARVEQVKP-----EDVK--VPAETPDFIESPDLEFNLWTSPDAAGTPYENGNRTWFYFSVRGGSLPNKTLRFNIMNLNRQSRLYSQGLNPFFRVSHGKHSSWQQVKDRCTYETVDGNFQISFLHSFTDVTRMSTTYFAFCYPYSYTECQQYMNSLEEKYVQDEDKNSQDTD-IYFHRETLVTSNDGLKVDLLTVSSMKGITENREKTLLGLYPDREKERARIFNNKKIVFLTSRVHPGETPASFVFNGFLDFILRENDDRSIALRNSFVFKMVPMLNPDGVKRGHYRTDIFGVNLNRTYQNPDAFRQPSIFAIKTLMMYHHFN-RIDPKLCTTDLQQSASQQAIPTAPKGDLLARKSSTDPNLTSETALELHKRLKEVAFSSCETINEASDECTSMKEQVQEKQGKPLDPDTHVGYDDMNSP-MKGTKELNLNKNNPD------NGVFIYIDLHGHASKRGCFIYGNHFTRESEMVDCMLLPKLISVNSLHFDFQACNFTEKNMYHKDKKDGLSKEGSGRVSMFKALGIIHSYTLECNYNTGRATNPISPATLDQGRATPPPQPGFPPRYTPEHYEEVGRGTAVAILDLINRNPWSRLPTSEYKSLNGVRDWLSKHIKNNTKVLSQQTKVNLKKKNG 646
            ME+   G+ FSS FDSGNLA VE+V+      E V     A T     SPD EFN+WT PD A T +ENGNR+WFYFSVRGG +P K ++ NIMN+N+QS+LYSQG+ PF R    +   W++++DR T+E  +  F +SF+H F +  R +TT+FAFCYP+SY++CQ+ +N L++++ ++   +S   D IY+HRE L  S DGL+VDLLT++S  G+ E+RE  L  L+PD    R   F  K+I FL+SRVHPGETP+SFVFNGFLDFILR +D R+  LR  FVFK++PMLNPDGV RGHYRTD  GVNLNR Y  PDA   P+I+  K +++YHH + R++ +   +  +   S    P AP  DL             E A  L               NEA  +C    ++   +  K  +P        +NS  +   +   L ++ PD      +GV  Y+DLHGHASKRGCF+YGN F+ ES  V+ ML PKLIS+NS HFDFQ CNF+EKNMY +D++DG SKEGSGRV+++KA GIIHSYTLECNYNTGR+ N I  A  D GRA+PPP P FP RYT E +E+VGR  A+A LD+   NPW R+  SE+ SL  +R W+ KH++ N++ LS    V + KK G
Sbjct:    1 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRPDCAETEFENGNRSWFYFSVRGG-MPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTR-PRWERIRDRPTFEMTETQFVLSFVHRFVE-GRGATTFFAFCYPFSYSDCQELLNQLDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPDTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRLNSQ---SSSEHQPSSCLPPDAPVSDL-------------EKANNLQ--------------NEA--QCGHSADRHNAEAWKQTEPAEQ----KLNSVWIMPQQSAGLEESAPDTIPPKESGVAYYVDLHGHASKRGCFMYGNSFSDESTQVENMLYPKLISLNSAHFDFQGCNFSEKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNYNTGRSVNSIPAACHDNGRASPPPPPAFPSRYTVELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVR-NSRGLSSTLNVGVNKKRG 616

The following BLAST results are available for this feature:

BLAST of TCONS_00054611-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054611-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CBPC5	0.000e+0	48.63	Cytosolic carboxypeptidase-like protein 5 OS=Homo ...	[more]

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TCONS_00054611-protein (polypeptide) - C. hemisphaerica