TCONS_00053360-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053360-protein
Unique NameTCONS_00053360-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053360-protein ID=TCONS_00053360-protein|Name=TCONS_00053360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=163bp
YKNGFGNPSSNYWLGLDAMHHMTKNIDQMLIKIEAESFNGNHAYVIFRGF
KVASESEKYRLTTGECIEKTSVYFNGDTGYTYCNSWSRMNQCYFSTPEID
NDNSNGKHCAKTRKSGGWFKQCTLLNFNGIYSTDGTDSGDYYLHWVPLDN
HEALKTLSMAIKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033674XLOC_033674Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053360TCONS_00053360Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 1..162
e-value: 5.6E-9
score: -18.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 1..162
e-value: 1.2E-26
score: 93.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..163
score: 21.674
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 1..162
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..94
e-value: 2.9E-22
score: 79.0
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 95..155
e-value: 2.3E-12
score: 46.4

Blast
[Close]
BLAST of TCONS_00053360-protein vs. Swiss-Prot (Human)
Match: FGL2 (Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.793e-18
Identity = 51/137 (37.23%), Postives = 68/137 (49.64%), Query Frame = 0 
Query:    1 YKNGFGNPSSNYWLGLDAMHHMTKNIDQMLIKIEAESFNGNHAYVIFRGFKVASESEKYRLTTGECIEKTSVYFNGDTGYTYCNSWSRMNQCY------FSTPEIDNDNSNGKHCAKTRKSGGWFKQCTLLNFNGIY 131
            YK GFGN    +WLG D +H +TK+  +M+++I+ E FNG   Y ++  F VA+E  KYRL  G         +NG  G        R N+ Y      F+TP+ DND     +C     SG WF  C   N NG Y
Sbjct:  271 YKAGFGNLRREFWLGNDKIHLLTKS-KEMILRIDLEDFNGVELYALYDQFYVANEFLKYRLHVGN--------YNGTAGDAL-----RFNKHYNHDLKFFTTPDKDNDRYPSGNCGLYYSSGWWFDACLSANLNGKY 393
The following BLAST results are available for this feature:
BLAST of TCONS_00053360-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL26.793e-1837.23Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1[more]
back to top