TCONS_00052645-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052645-protein
Unique NameTCONS_00052645-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1004

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052645-protein ID=TCONS_00052645-protein|Name=TCONS_00052645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1004bp
MTKMVQSAKDGGMKKQENNGDLNQSNSSAKQSSKQQKKLLEDDNVCKNCS
NALSVAEQQQLNSELTEKSSQSTIRYLAGKFKKINKRSKIPDVEYWTEQA
PQENVERTQQQSPDVDKLRQQFEIVKGDMEENKDLLQVVEDVKVERKEDG
GKKKSSGLRRSLSWRLRKDKGKNELNDDQSPKIKEQTEKPNKFSSIRSMF
EPLSPSEKKKFSVQQGDQQKTPIRRRSTNSKGPHNRSKTDSVISLRYSKI
EDDGVHLSPNTVNSPLSTPSSPEMLNSSGGLSSEVYSSSDSSPVSPPDCR
KKSFMTRITQDTQVESRQQSSERIIVDVPLHLIPPEIAVRSPKSSPKTSR
RIIAAKARPQSPASPLSSSPETRTRLSTFAHKKTSITIPSSENHNQHTST
KKLSESPLSSPETRTRLSTVIRRPTASSSTQNEEPKFVTAKEINNNLFDR
MDNRKRQENEDTAHAPVIKPTPIRPSTIGVVKPKQNGSNVAMVSPIMKSD
MVQTMASTSPLTTPSTTDNIHENSSSLRISPTSKSVRRRQTIDNVERPGN
HLYTSGNTRQIEVFLLLDQDQKTKDAFKIETINIDRSISYRDIENSIIEG
FNKHLQLLDQQKLDINREDIAYLQMAQHKISIGSPFDLSQVNIENGYLPC
QMFLKGNNEWSLASMAYDTLIPKTYLEKYVSLILTHRQVVFYGPSGTGKS
YIARRIATIISHRMNNNTIPMLTYKNMTPEQWKDLLKDLKNNKRNQPYVI
LVDGFASNFIKQGKDLTEIISTSESIHPQPYVICTLTQSPNYEIPSTWQN
NFKWIWLPNHEEPINGVLQRFLRRRYTQHGHKDTYQEVFRVADWLAETWR
YINTILEKFNSAECTIGPTMFYTCPIDINAAEEWFIDLWNYSITPYFLHA
IKCGIKLYGQRHQWIDPLDWILKSYPWKPNTTPGKVDKKTKLRRIRPEDV
GFQTSCNNTQPQVDSESEKQRLLDFLRQLEILMRDGGLGELPNFEQSSQY
ESSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033267XLOC_033267Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052645TCONS_00052645Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 689..762
e-value: 1.8E-6
score: 28.3
NoneNo IPR availableGENE3D3.40.50.300coord: 671..810
e-value: 1.5E-10
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..483
NoneNo IPR availableCDDcd00009AAAcoord: 689..713
e-value: 3.72645E-4
score: 39.4367
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 677..808

Blast
[Close]
BLAST of TCONS_00052645-protein vs. Swiss-Prot (Human)
Match: NAV2 (Neuron navigator 2 OS=Homo sapiens GN=NAV2 PE=1 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.641e-64
Identity = 122/366 (33.33%), Postives = 203/366 (55.46%), Query Frame = 0 
Query:  648 LPCQMFL----------KGNNEWSLASMAYDTLIPKTYLEKYVSLILTHRQVVFYGPSGTGKSYIARRIATIISHR----MNNNTIPMLTYKNMTPEQWKDLLKDL------KNNKRNQPYVILVDGFASNFIKQGKDLTEIISTSESIHPQPYVICTLTQS----PNYEIPSTWQNNFKWIWLPNHEEPINGVLQRFLRRRY--TQHGHKDTYQEVFRVADWLAETWRYINTILEKFNSAECTIGPTMFYTCPIDINAAEEWFIDLWNYSITPYFLHAIKCGIKLYGQRHQWIDPLDWILKSYPWKPNTTPGKVDKKTKLRRIRPEDVGF-------QTSCNNTQPQVDSESEKQRLLDFLRQLE 980
            LPC   +          KG  E SL S+ +++LIPK  L++YVSL++ HR+++  GPSGTGK+Y+A R++  I  R    + +  I      + + ++ +  L +L      +NN  + P VI++D    +    G+    +++     H  PY+I T+ Q+    PN ++     +NF+W+   NH EP+ G L RFLRR+   T+   +    E+ ++ DW+ + W ++N  LE  +S++ TIGP +F +CPID++ +  WF DLWNYSI PY L A++ G++LYG+R  W DP  W++ +YPW  +    +  +   L ++RPEDVGF       + S +   P  D+E +   L++ L +L+
Sbjct: 2102 LPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNAVDMPLVIILDNL-HHVSSLGEIFNGLLNCK--YHKCPYIIGTMNQATSSTPNLQL----HHNFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDTYPWAASP---QQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDP--LMNMLMRLQ 2455
The following BLAST results are available for this feature:
BLAST of TCONS_00052645-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAV21.641e-6433.33Neuron navigator 2 OS=Homo sapiens GN=NAV2 PE=1 SV... [more]
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