TCONS_00052086-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052086-protein
Unique Name	TCONS_00052086-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	433

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052086-protein ID=TCONS_00052086-protein|Name=TCONS_00052086-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
MVFKFKEPIVDKGLCWLMLAMVFTIYFVLIGTFFSYGVWLPRVMEEFNCN
QEQAAWVASIATGLLVLLALPSDLACHYFGVFNMSICGSLLCGIGMIISS
YLQNIYHLYLSFGVLMGIGSSLLYTPTLVMMGRWFHKYQALSTTIVMVGA
PSGSLVFNIITEKIMQNFKLRSVMVVYGICLMCITLVCSFGYMPFSPTFI
EKRSNIENKEEAKGQDSLEIGSGFEFRASLLKNEAYWLYNVSRFFSVLAH
YVPMFHLIKYAMTMGISSSTASIMLAVWSGSNFIGRLGFGIFASKYRSKV
PITYQIVLFMTSLVCAAAFFAETAWSLFLYCFIYGVCEGAIVGIASILTI
DLTCLRDLGAAWGIQQTINGIPTIAGPVLIGAMNDANLFRPNFMFIFTGG
TFLVSTVFMHLARTIHNRRNKISKEEEHQSQIE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032989	XLOC_032989	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052086	TCONS_00052086	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 22..351 e-value: 9.9E-23 score: 80.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 229..430 e-value: 8.0E-25 score: 86.9
None	No IPR available	GENE3D	1.20.1250.20		coord: 6..210 e-value: 2.9E-23 score: 81.7
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 17..417 score: 10.739
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 19..413 e-value: 1.00074E-19 score: 87.3693
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 12..421

Blast

[Close]

BLAST of TCONS_00052086-protein vs. Swiss-Prot (Human)
Match: MOT3 (Monocarboxylate transporter 3 OS=Homo sapiens GN=SLC16A8 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.249e-25
Identity = 96/435 (22.07%), Postives = 186/435 (42.76%), Query Frame = 0

Query:    4 KFKEPIVDKGLCWLMLAMVFTIYFVLIGTFFSYG------VWLPRVMEEFNCNQEQAAWVASIATGLLVLLALPSDLACHYFGVFNMSICGSLLCGIGMIISSYLQNIYHLYLSFGVLMGIGSSLLYTPTLVMMGRWFHKYQALSTTIVMVGAPSGSLVFNIITEKIMQNFKLRSVMVVYGI----CLMCITLVCSFGYMPFSPTFIEKRSNIENKEEAKGQDSLEIGSGFEFRA--------------SLLKNEAYWLYNVSRFFSVLAHYVPMFHLIKYAMTMGISSSTASIMLAVWSGSNFIGRLGFGIFA--SKYRSKVPITYQIVLFMTSLVCAAAFFAETAWSLFLYCFIYGVCEGAIVGIASILTIDLTCLRDLGAAWGIQQTINGIPTIAGPVLIGAMNDANLFRPNFMFIFTGGTFLVSTVFMHLA 412
            +  E   D G  W++L   F +      T F+YG      V+   +M +F+      AWV+SI   +L      S +    FG   + + G LL   GMI++S+   +  LYL+ GVL G+G +L + P+L+M+G +F + + L+  +   G+P      + + +++++ F  R   ++ G     C  C  ++              + S  +   +A G+   + G+G + R               ++  + A+ +Y V++F   L  +VP   L+ YA   G+  + A+ +L++    + + R   G  A  ++ R  VP  + + L    L   ++  A +  +L  +C  +G+  G +  +   + +         +A G+   +     + GP   G + D  L     +F   G    ++ VFM +A
Sbjct:    7 RRGEGPPDGGWGWVVLGACFVV------TGFAYGFPKAVSVFFRALMRDFDAGYSDTAWVSSIMLAMLYGTGPVSSILVTRFGCRPVMLAGGLLASAGMILASFATRLLELYLTAGVLTGLGLALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLERFGWRGGFLLLGGLLLHCCACGAVMRPPPGP---GPRPRRDSAGDRAGDAPGEAEAD-GAGLQLREASPRVRPRRRLLDLAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDTDAAFLLSIVGFVDIVARPACGALAGLARLRPHVPYLFSLALLANGLTDLSSARARSYGALVAFCVAFGLSYGMVGALQFEVLMAAVGAPRFPSALGLVLLVEAAAVLIGPPSAGRLVDV-LKNYEIIFYLAGSEVALAGVFMAVA 430

The following BLAST results are available for this feature:

BLAST of TCONS_00052086-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052086-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MOT3	1.249e-25	22.07	Monocarboxylate transporter 3 OS=Homo sapiens GN=S...	[more]

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TCONS_00052086-protein (polypeptide) - C. hemisphaerica