TCONS_00051658-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051658-protein
Unique NameTCONS_00051658-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length296

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051658-protein ID=TCONS_00051658-protein|Name=TCONS_00051658-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MNSKVVAIVISSFILILTQTTDSTHALPRHRDIRSTSTGSRKGRLSITVV
REFLDKNSNPEEEIEAVERTSLSVRTTSLGAGSSSVGEPSHSREPTWFSR
NGSNNFKKMKRRSRRKRQKRGAKVNTDAAYISEFKTNQRVYKYCNKLGFC
LRLNADGKVDGTRNKEDPYTVLLFESHGRSIIRIKGYYANKYLTMNQKGV
PAGEVRYFCQADPHFFDSLFRLTEEENRWDTIASYKYYFEEKFDMLVGIT
KDAQLKQPWKASPGQYATQFLPLPYEIKDNFVEEMRLKDQQKKSTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032698XLOC_032698Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051658TCONS_00051658Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002209Fibroblast_GF_fam
IPR008996IL1/FGF
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008083 growth factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00262IL1HBGFcoord: 179..206
score: 23.85
coord: 217..237
score: 26.52
coord: 263..272
score: 45.69
NoneNo IPR availableGENE3D2.80.10.50coord: 124..295
e-value: 5.7E-24
score: 84.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..123
IPR002209Fibroblast growth factor familySMARTSM00442FGF_2coord: 136..274
e-value: 1.7E-4
score: 11.2
IPR002209Fibroblast growth factor familyPFAMPF00167FGFcoord: 143..271
e-value: 8.6E-21
score: 74.2
IPR008996Cytokine IL1/FGFSUPERFAMILY50353Cytokinecoord: 135..276

Blast
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BLAST of TCONS_00051658-protein vs. Swiss-Prot (Human)
Match: FGF2 (Fibroblast growth factor 2 OS=Homo sapiens GN=FGF2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 2.473e-16
Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 0 
Query:  132 SEFKTNQRVYKYCNKLGFCLRLNADGKVDGTRNKEDPYTVLLFESHGRSIIRIKGYYANKYLTMNQKGVPAGEVRYFCQADPHFFDSLFRLTEEENRWDTIASYKYYFEEKFDMLVGITKDAQLKQPWKASPGQYATQFLPL 273
              FK  +R+Y  C   GF LR++ DG+VDG R K DP+  L  ++  R ++ IKG  AN+YL M + G     +   C  D  FF    RL  E N ++T  S KY         V + +  Q K   K  PGQ A  FLP+
Sbjct:  157 GHFKDPKRLY--CKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGR---LLASKCVTDECFF--FERL--ESNNYNTYRSRKYT-----SWYVALKRTGQYKLGSKTGPGQKAILFLPM 284
The following BLAST results are available for this feature:
BLAST of TCONS_00051658-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGF22.473e-1636.62Fibroblast growth factor 2 OS=Homo sapiens GN=FGF2... [more]
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