Hlh-6 (polypeptide) - C. hemisphaerica

Overview
NameHlh-6
Unique NameTCONS_00048661-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048661-protein ID=TCONS_00048661-protein|Name=Hlh-6|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MKMIKHEDLYYEDYSSHSSSENENDSLDGENCRLPKRTKVDCTKRLKASA
RERRRRHVLNDALERLRRKVPSVGSRSSKLSKIEVLRMAIDYIGMLSYYV
SSSPDQQSFHYSQQDEQQVPQLEHYQQQAMYNNNNNLISYQADAYLQQHA
WQQQGSPVMNEMNQMLEMQHLQQLTHMDDYNNQQPYPPM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030920XLOC_030920Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048661TCONS_00048661Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 49..102
e-value: 1.1E-13
score: 61.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 44..96
e-value: 9.8E-17
score: 60.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 38..173
e-value: 1.5E-16
score: 59.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 43..96
score: 16.977
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 41..97
e-value: 4.02267E-15
score: 65.6983
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 43..118

Blast
The following BLAST results are available for this feature:
BLAST of Hlh-6 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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