TCONS_00047950-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047950-protein
Unique NameTCONS_00047950-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047950-protein ID=TCONS_00047950-protein|Name=TCONS_00047950-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
FKKYPTTLGLIFPHLQHLDLTANKIMKISKKDFTNSRSLKKLILNKNLIE
VLPTDTFVYLVRAEKIHLTENRIKNISPFAFRGLSKTVNTIMLNRNQITN
LTAGVFKFMHNPTNRIFLHQNQIQNLPDNLFGDVTTINRLDLYNNNLQQI
NTKTFEHINVDVINFEYNNITLLPVTDLKTKFLLLAXHIITCDRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030511XLOC_030511Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047950TCONS_00047950Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 109..133
e-value: 140.0
score: 3.8
coord: 12..35
e-value: 8.3
score: 13.9
coord: 60..83
e-value: 51.0
score: 7.5
coord: 134..157
e-value: 41.0
score: 8.2
coord: 84..108
e-value: 380.0
score: 0.3
coord: 37..59
e-value: 44.0
score: 8.0
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 2..99
e-value: 2.0E-15
score: 56.0
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 100..180
e-value: 1.0E-7
score: 30.9
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 8..176
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 64..110
e-value: 2.2E-6
score: 27.2
coord: 115..170
e-value: 6.5E-7
score: 28.9
coord: 13..61
e-value: 4.4E-8
score: 32.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 136..157
score: 5.679
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 38..59
score: 6.126
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 14..35
score: 7.204
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 62..83
score: 5.479

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047950-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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