TCONS_00047711-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047711-protein
Unique NameTCONS_00047711-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047711-protein ID=TCONS_00047711-protein|Name=TCONS_00047711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1168bp
MGVLISKKKPKPAPSQPELQPSQPKPEPVPEPEQEPSREPTPEVVSEEEE
EEEPEEEQEEEEEEQEEPEEEEEPEDEPEDDENEEEKESGNEEVVEYSSD
VASELLKGVIDINIPSQARIVRIFTSSTFTDTFNERNALMVKVYPKLKEY
CQSTGYDFQVVDMRWGVRDEATADHMTSELCMKELKLCQDISTGPSFVTF
LSHKYGYRPFPPKIVATEFEAMFKVVEEQSDKDLLQKWFLKDENIIPTTY
VLQPITDLLPNYGNHNVSKEERGKASGEWWAAFERMQVVFREAADKVFKG
KPNIRWKYFQSVTEDEIQRGILKSKDAKSQCHWFYRNIQDLRQNIDDKAA
RNFIDKLGQNLDDEAVGFTEDLKATKIPGVLPQENINTYDIQWSAEHGVN
PETSDVHKKYIEQLCDDFYRILVVMIDNGIKERKAADIDDELVKEICQHS
SMCKEKSRIFQGRQDIIDQIISYIGKEEEDEENRTTLVVYGESGCGKTSI
MAKAAALAKQEYPDHIQVTRFLGTTADSSTISRLLNSICNQLQRSSQLPI
DAAQPQSFKDQVELLENIIEKMDDSELPCILFLDSIDQLSPDDGAYLMKW
LPKKLPKQFKIIISALPDEKYNIINSLKGMVPAEGFIEVTKLPTDTANDI
LNAWLVDSKRQLTTKQNEMVMNSFNQAPLPLFLKLAFDQATKWKSYQPME
SISLEKNVKDSINRLFSDLERMHGKYLVSHALGLITASKHGLSDAEMDDL
LSIDDEVLNDVYQYWVPPVRRIPSLLWIRIRNDLGSYIIYRGASGVLVNN
WYHRQFIETATERYLSIDQKKNFHTIMADYFLGKWSSGAKKGFTDKSGKD
GEEDRLVAAQPNKFQAKDDTEVFNYRKLSELPRHLIESDDLVNLKKRVLF
DFDFLLCKLRAFGYQPLYEDVSEARLVYPQDKDIKMLSEILKISSRTLLI
DPMQFPTQLYGRLDSENLSPDIKRLLDDASNSGIPCFIPNKICFETPGGS
LLNTLAGHTGMVEHASFTQDGKRLLSVGGDSTLRIWDLESGAQIRSTQLE
TAAMAVHSYNDDKCALAVSYGSLVAIDLQTDEIYYDEYHTAAYGKSSDIS
PNRQRLVMCNDEEMFIFNTSDVKLVLMRSEKEKAKQDPTGFQDIMMTANE
TFAYTRGNKEEIYIRKYD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030386XLOC_030386Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047711TCONS_00047711Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR016156FAD/NAD-linked_Rdtase_dimer
IPR025139DUF4062
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR007111NACHT_NTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..67
NoneNo IPR availablePFAMPF05729NACHTcoord: 486..655
e-value: 1.2E-11
score: 44.7
NoneNo IPR availableGENE3D3.40.50.300coord: 462..628
e-value: 3.8E-13
score: 48.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..97
NoneNo IPR availableCDDcd00009AAAcoord: 462..629
e-value: 3.32922E-4
score: 39.8219
NoneNo IPR availableSUPERFAMILY69322Tricorn protease domain 2coord: 993..1121
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 483..646
e-value: 1.4E-4
score: 31.2
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 998..1037
e-value: 4.4E-8
score: 42.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1005..1046
score: 16.056
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 872..1168
e-value: 3.2E-17
score: 61.9
IPR016156FAD/NAD-linked reductase, dimerisation domainGENE3D3.30.390.30coord: 34..140
e-value: 0.0015
score: 18.1
IPR025139Domain of unknown function DUF4062PFAMPF13271DUF4062coord: 122..220
e-value: 2.6E-8
score: 34.0
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1024..1038
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1005..1046
score: 14.529
IPR007111NACHT nucleoside triphosphatasePROSITEPS50837NACHTcoord: 485..618
score: 10.375
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 459..722

Blast
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BLAST of TCONS_00047711-protein vs. Swiss-Prot (Human)
Match: NWD1 (NACHT domain- and WD repeat-containing protein 1 OS=Homo sapiens GN=NWD1 PE=1 SV=3)

HSP 1 Score: 379.022 bits (972), Expect = 1.685e-110
Identity = 285/928 (30.71%), Postives = 456/928 (49.14%), Query Frame = 0 
Query:  146 KLKEYCQSTGYDFQVVDMRWGVRDEATADHMTSELCMKELKLCQDISTGPSFVTFLSHKYGYRPFPPKIVATEFEAMF-KVVEEQSDKDLLQKWFLKDENIIPTTYVLQPITDLLPNYGNHNVSKEERGKASGEWWAAFERMQVVFREAADKVFKGK--PNIRWK-YFQSVTEDEIQRGILKSKDAKSQCHWFYRNIQDLRQNIDDKAARNFIDKLGQN-LDDEAVGFTEDLKATKI---PGVLPQENINTYDIQWSAEHGVNPETSDVHKKYIEQLCDDFYRILVVMIDNGIKER-KAADIDDE----LVKEICQHSSMCKEKSRIFQGRQDIIDQIISYIGKEEEDEENRTTLVVYGESGCGKTSIMAKAA-ALAKQEYPDHIQVTRFLGTTADSSTISRLLNSICNQLQRSSQLPIDAAQP-QSFKDQVELLENIIEKMDDSELPCILFLDSIDQLSPD-DGAYLMKWLPKKLPKQFKIIISALPDEKYNIINSL-KGMVPAEGFIEVTKLPTDTANDILNAWLVDSKRQLTTKQNEMVMNSFNQAPLPLFLKLAFDQATKWKSYQPMESISLEKNVKDSINRLFSDLERMHGKYLVSHALGLITASKHGLSDAEMDDLLSIDDEVLNDVYQYWVPPVR---RIPSLLWIRIRNDLGSYIIYRGASGVLVNNWYHRQFIETATERYLSIDQKKNFHTIMADYFLGKWSSGAKKGFT-DKSGKDGEEDRLVAAQPNKFQAKDDTEVFNYRKLSELPRHLIESDDLVNLKKRVLFDFDFLLCKLRAFGYQPLYEDVSEARLVYPQ--DKDIKMLSEILKISSRTLLIDPMQ---FPTQLYGRLD--SENLSPDIKRLLDDASN----SGIPCFIPNKICFETPGGSLLNTLAG-HTGMVEHASFTQDGKRLLSVGG-DSTLRIWDLE 1039
            K + +CQ  G  F+VVD+RWG+R+    DH+T+ELC++E+  C   S GP+FV  +  +YG    P +I   E+E +   +    SD +L+ ++F +DEN  P TYVLQ      P  G     +E               +  V R  A +  +       +W+ Y +SV E EI+R +L S+D +     F R IQDL ++I +  A   +D+L    LD +A      LK+      PGVL      T+ + WS +  VNP+ +  H  Y+++L + F    VV  ++ +  R +  D   +    L +EI  H     E  + F GRQ+++ ++   +    +D +  T LV++G  G GKT++M K A  + +      + V R LGT+  SS    LL SIC Q+  +  LP+  AQ   +    V+    ++  +       ++ L            A  + WLP   P +  +I+SA       ++++L + ++  E + EV  L  +    ++   L  ++R L+    +++  S  +   P  L+LAF++A KW S+     + L    +++ ++L + LE+ HG+ LV+H LG I +S+HGLS+AE+ D+LS+DDEVL DVY+ W PP +   R P LLW+R+R DLG Y+  R   G  +    HRQ +E   ERYLS  ++   H ++AD+F G WS G KK  T    GK    DR VA QP  F       V N RKL ELP HL+ S  L  LK+ VL    ++ C+  + G + L +D     L  P     ++ ++ E L++    + +  M+     T+L  RL   + +    + +L   A +       P  +P     + PGG L  TL+G H G+   A   ++  +LL +G  D  + +WD+E
Sbjct:   14 KCQTFCQRHGLMFEVVDLRWGIRNIEATDHLTTELCLEEVDRCWKTSIGPAFVALIGDQYGPCLIPSRIDEKEWEVLRDHLTARPSDLELVARYFQRDENAFPPTYVLQA-----PGTGEACEPEEAT-------------LTSVLRSGAQEARRLGLITQEQWQHYHRSVIEWEIERSLLSSEDREQGATVFLREIQDLHKHILEDCALRMVDRLADGCLDADAQNLLSSLKSHITDMHPGVL-----KTHRLPWSRDL-VNPK-NKTHACYLKELGEQF----VVRANHQVLTRLRELDTAGQELAWLYQEIRHHLWQSSEVIQTFCGRQELLARLGQQL--RHDDSKQHTPLVLFGPPGIGKTALMCKLAEQMPRLLGHKTVTVLRLLGTSQMSSDARGLLKSICFQVCLAYGLPLPPAQVLDAHTRVVQFFHTLLHTVSCRNFESLVLLLDAMDDLDSVRHARRVPWLPLNCPPRVHLILSAC-SGALGVLDTLQRVLLDPEAYWEVKPLSGNQGQQMIQLLLAAARRTLSPVHTDLLWASLPECGNPGRLRLAFEEARKWASFT--VPVPLATTAEEATHQLCTRLEQTHGQLLVAHVLGYIVSSRHGLSEAELKDVLSLDDEVLQDVYRDWTPPSKELLRFPPLLWVRLRRDLGYYLARRPVDGFTLLAIAHRQLVEVVRERYLSGSERAKRHGVLADFFSGTWSQGTKKLITLPLVGKPLNLDRKVAPQPLWF----SHTVANLRKLKELPYHLLHSGRLEELKQEVLGSMSWISCRGISGGIEDLLDDFD---LCAPHLDSPEVGLVREALQLCRPAVELRGMERSLLYTELLARLHFFATSHPALVGQLCQQAQSWFQLCAHPVLVPLGGFLQPPGGPLRATLSGCHKGITAMAWGVEE--KLLVIGTQDGIMAVWDME 898
The following BLAST results are available for this feature:
BLAST of TCONS_00047711-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NWD11.685e-11030.71NACHT domain- and WD repeat-containing protein 1 O... [more]
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