TCONS_00047064-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047064-protein
Unique NameTCONS_00047064-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047064-protein ID=TCONS_00047064-protein|Name=TCONS_00047064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MTSAIRMTKAKLHKPQYYTPISSSLYDHRLFHHRKESSTYRNHGCRCAFD
DKRANVKSRNFLPSNQALSTKITSSDFLSINGTALSKTFQRQKITSSIYQ
QSPNIIKPYLSLVRFDKPAGTWLLYLPCTWSICLAATPGHFPDLKMLALF
GTGAFIMRGAGCVINDMWDSDFDKKVDRTAMRPIASGQLTHAQATVFLAG
LLSCGLGVLLSLNWYSVFLGAASMGLVVAYPLMKRFTYWPQIFLGLTFNW
GALLGWTAVQGSCDWSVCLPLYTAGILWTLHYDTIYAHQDKVDDIQVGVK
STALFMGDRTKMWLTGFSTTMVGCLTMVGLMSEQCWPYYASLAGISTHLA
WQIYTVNLDNPTDCFSKFSSNRYLGMVLTTAIICSTLLKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030007XLOC_030007Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047064TCONS_00047064Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006370HB_polyprenyltransferase
IPR000537UbiA_prenyltransferase
IPR030470UbiA_prenylTrfase_CS
IPR031103HB_octoprenylTrfase
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004659prenyltransferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
Vocabulary: Biological Process
TermDefinition
GO:0006744ubiquinone biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004659 prenyltransferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0063704-hydroxybenzoate polyprenyltransferaseTIGRFAMTIGR01474TIGR01474coord: 107..386
e-value: 3.0E-114
score: 379.2
IPR000537UbiA prenyltransferase familyPFAMPF01040UbiAcoord: 126..368
e-value: 5.9E-55
score: 186.2
IPR030470UbiA prenyltransferase conserved sitePROSITEPS00943UBIAcoord: 165..187
IPR0311034-hydroxybenzoate octaprenyltransferaseHAMAPMF_01635UbiAcoord: 101..387
score: 28.967
NoneNo IPR availableCDDcd13959PT_UbiA_COQ2coord: 114..385
e-value: 6.56678E-123
score: 358.317

Blast
[Close]
BLAST of TCONS_00047064-protein vs. Swiss-Prot (Human)
Match: COQ2 (4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Homo sapiens GN=COQ2 PE=1 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 6.646e-132
Identity = 179/293 (61.09%), Postives = 226/293 (77.13%), Query Frame = 0 
Query:   95 TSSIYQQSPNIIKPYLSLVRFDKPAGTWLLYLPCTWSICLAATPGHFPDLKMLALFGTGAFIMRGAGCVINDMWDSDFDKKVDRTAMRPIASGQLTHAQATVFLAGLLSCGLGVLLSLNWYSVFLGAASMGLVVAYPLMKRFTYWPQIFLGLTFNWGALLGWTAVQGSCDWSVCLPLYTAGILWTLHYDTIYAHQDKVDDIQVGVKSTALFMGDRTKMWLTGFSTTMVGCLTMVGLMSEQCWPYYASLAGISTHLAWQIYTVNLDNPTDCFSKFSSNRYLGMVLTTAIICSTL 387
             +++   +P  ++PYL L+R DKP GTWLLYLPCTWSI LAA PG FPD  ML+LFGTGA +MRGAGC INDMWD D+DKKV RTA RPIA+G ++  Q+ VFL G L+  LGVLL LN+YS+ LGA S+ LV+ YPLMKR +YWPQ+ LGLTFNWGALLGW+A++GSCD SVCLPLY +G++WTL YDTIYAHQDK DD+ +G+KSTAL  G+ TK WL+GFS  M+G L++VG+ S Q  PYYA+L  +  HL  QIYT+++  P DC++KF SNR LG+++   I+   L
Sbjct:   60 AAAVVDSAPRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDQDYDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAGSLLLVITYPLMKRISYWPQLALGLTFNWGALLGWSAIKGSCDPSVCLPLYFSGVMWTLIYDTIYAHQDKRDDVLIGLKSTALRFGENTKPWLSGFSVAMLGALSLVGVNSGQTAPYYAALGAVGAHLTHQIYTLDIHRPEDCWNKFISNRTLGLIVFLGIVLGNL 352
The following BLAST results are available for this feature:
BLAST of TCONS_00047064-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COQ26.646e-13261.094-hydroxybenzoate polyprenyltransferase, mitochond... [more]
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