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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000093 ID=TCONS_00000093|Name=TCONS_00000093|organism=Clytia hemisphaerica|type=transcript|length=2095bp
ctcacatcctttttctgataaacatacaaatttTCAGCCTTCAACtattt
tttcctccatttccagaaacatttgttAATCAACAGTTGCAACTTTTTTT
TCTCCCATggaattcaaattttcaaatgtcgCAAAAACGTTCTGCAATTT
ACCAATTTCCCGTCTAGctcgtgtccacagtgttaaaTACCGCTAGAAAG
CTAAGACCACTGGCTTTCTTTTATTAAAAACTGGAatgctttagcataca
tagaagaaaagttagaagcgttcaaagttcacggaaaaatgaaatatttg
gttTGATGTCAACAAAAGGTGtgtgacttctggagtcgctaaaTTATAAT
CAAACGGCTGAATTATTCAAGTccaatcaaacttaatcgaacgacaAATG
TTCTATTTAAAAAAGTCACTAAGATTGAATGGAGAATCAATTGCTGAAGa
ttggaaaaaatgaaacaGTTGCTTCCTACCAAGAGGCCTTTTTTGTTGCT
GTTGACAGACTTAGCAGTTCTGACTGCACCAAAGCAGACCACAAGAAATT
TGTTGCTCTATGCAAGAAAATTAAAGATGTACACTTCTTATGCAAAATCA
CTGAGAGGCTGCTAAGGTTAACCCCATATGTTGCATTATATTACGAAAAC
GAGGGTTTTATCGAAATGCTAGCTTCGTTGCTGGAAACCTTGTTGAAGTT
GTTAACCTCTAAATCTTACAGCAAAGCCAAGCCTGTGAAGATCGATTCTA
TGTCTGGTGTGGTTATTACACTTTTTGCTAATGTTAATGATGGTTTGTTC
AATCCAGATATTCTAACCAAATTGATATCCAACCAGTATATCTCCCAAGA
GCCATCAACTATTGAGGCTATTCTATGGGGTTTGTTGAGAAAGGATTATT
TggtcaaaaaagatttgacatCTAATAAGAACTTTTGCACCTTGTTTCGT
CAATTTGGAATTGCAACTGCTAAAACCAAAACAGCCCAATTTTATCGCTA
TTACATAGCAATCATCCAATTTCTAGTCAAGAATTATGACTGGGAATTGG
CAAAGGAGCTTCTACCTTCAGTTCTTGATATCTCAGATAATAATGAAGAT
TTTGAGTATTTCTTTGCACTCTTTGAAGGCTTGGAATCAGTAAAATCTGA
ACATCTCAAAATACTTGTTCAAAGTGGTATTTCATTTTTCGCAAAGGCTG
TTTCTCGTGAAAAATTGTATGGTATTGGATATATTGATATATTTGAATAC
CAAAGCATGTTGAAGTatctaaaaattgtttttaaagatGATTTTTATTG
CAATACAGCCAAACAGCTTACAACCCTTGATGAGTTCAAGTCTAAAGATT
ATGAAAAAATGTGTAACACTACTAAAGAAAGTATTTTGCAAAGACTgatt
caagatttgaaaaaggATTTCTATTTTAAGGAATCTTACATTGATCTAGT
ACGTGTTCAGATAGAAAACCTAAAGACGCTACAAGACAAAGGGTGTCCAA
AATCGTATTGGGAGCAGCCAGATGCCATTTTTTATGACGAACATATTGAA
GAATTTTTAGAAAGTGATAAAGTGACACTAGTTGTTTctgatgaatttga
aaatgacTTGGAATATGCAAATTCATGGATTAATGATTATGCCGGACCAC
ATCTTCACAGAGGTTATAGTTTCAGTGCTATCGCAAGGTTATCCACAGAA
GGCACAGTTGAAGTTATActgcaaaaagaaaaacatatatATGAAAGGAA
ACGAGATGGATATTTTAGACTGATGAATGAATTATTTGAATTGGAAACTT
TCTTGCAGTCTCCAAAGATAGTGCGTattggcacaaaaaggaaatacAAT
CTCagagaacgaaaaagaaaataaatcttaTTGTAGAAAATCGTATCTTA
TCGtagaaaattttcttaattcatCCAATACCTCACTTTTTCAATTGTTT
GAGTGAGATTAGGTAGATAATTCATAAAATTGTAGCAAGACCgtaattat
tttattaatttctaggaatttttcaaaattttgataaaaacttaactaaa
aatttttttaacatgttTCATGTGTTTTACCCTTTCTGGTATTGC Run BLAST on NCBI transcript from alignment at sc0000001:1843869..1846692+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000093 ID=TCONS_00000093|Name=TCONS_00000093|organism=Clytia hemisphaerica|type=transcript|length=2824bp|location=Sequence derived from alignment at sc0000001:1843869..1846692+ (Clytia hemisphaerica)
ctcacatcctttttctgataaacatacaaatttTCAGCCTTCAACtattt
tttcctccatttccagaaacatttgttAATCAACAGTTGCAACTTTTTTT
TCTCCCATggaattcaaattttcaaatgtcgCAAAAACGTTCTGCAATTT
ACCAATTTCCCGTCTAGctcgtgtccacagtgttaaaTACCGCTAGAAAG
CTAAGACCACTGGCTTTCTTTTATTAAAAACTGGAatgctttagcataca
tagaagaaaagttagaagcgttcaaagttcacggaaaaatgaaatatttg
gttTGATGTCAACAAAAGGTGtgtgacttctggagtcgctaaaTTATAAT
CAAACGGCTGAATTATTCAAGTccaatcaaacttaatcgaacgacaAATG
TTCTATTTAAAAAAGTCACTAAGATTGTGAGTATTGCCAGACAgtgtttc
agctagatcttattttttccctaaattatgctaaacgaccccacttgTTC
ACTTCTTCTGGTATGAAATCGTAATAAGGAAACTTAGAAACTTACTAAAC
TAAGCGGTGCTGCAAATAACAACTGATGActggtaattaccggtcatctT
GTAGTTTCTACCGGCCATTCTGAAGCTCAATCTTTCATTTTGTCCAGTTA
AAATTTGAAGACTAGAGGCTTTAGATACTTAAAATAGCGCTTCTAATTTA
AGAGTCGAATAGATTTTAAATTAGTGTTTACTGTAGCCAATCTCAAGATT
ATTTCGGACTTTTCTAAACAGGTTCTGCTAGACCTCCCgctcaaattatt
tttgttgtGTTCAAAAAATTACTggccaactgaaatttcctcatTTGCAG
cgcttctttttcattttgaaagttAGAAAAAAAACTAGTACGCTTCTATA
TGCTTTTTGAAGAGCCTCCCTCCTCCCCCCTCCCCCTCAGAGTTTACATA
CTTTTTGAAGGGCCCATACATACCTTATAACAGATTTTTAAGACAAAAGA
ATTACTTTGATCTTATCTACGTCACTAATGTTTATTAAATCTATATTGAA
TCAATATTACGATcactttatatttttcattgatCATAATAGGAATGGAG
AATCAATTGCTGAAGattggaaaaaatgaaacaGTTGCTTCCTACCAAGA
GGCCTTTTTTGTTGCTGTTGACAGACTTAGCAGTTCTGACTGCACCAAAG
CAGACCACAAGAAATTTGTTGCTCTATGCAAGAAAATTAAAGATGTACAC
TTCTTATGCAAAATCACTGAGAGGCTGCTAAGGTTAACCCCATATGTTGC
ATTATATTACGAAAACGAGGGTTTTATCGAAATGCTAGCTTCGTTGCTGG
AAACCTTGTTGAAGTTGTTAACCTCTAAATCTTACAGCAAAGCCAAGCCT
GTGAAGATCGATTCTATGTCTGGTGTGGTTATTACACTTTTTGCTAATGT
TAATGATGGTTTGTTCAATCCAGATATTCTAACCAAATTGATATCCAACC
AGTATATCTCCCAAGAGCCATCAACTATTGAGGCTATTCTATGGGGTTTG
TTGAGAAAGGATTATTTggtcaaaaaagatttgacatCTAATAAGAACTT
TTGCACCTTGTTTCGTCAATTTGGAATTGCAACTGCTAAAACCAAAACAG
CCCAATTTTATCGCTATTACATAGCAATCATCCAATTTCTAGTCAAGAAT
TATAACTGGGAATTGGCAAAGGAGCTNTATTACATAGCAATCATCCAATT
TCTAGTCAAGAATTATGACTGGGAATTGGCAAAGGAGCTTCTACCTTCAG
TTCTTGATATCTCAGATAATAATGAAGATTTTGAGTATTTCTTTGCACTC
TTTGAAGGCTTGGAATCAGTAAAATCTGAACATCTCAAAATACTTGTTCA
AAGTGGTATTTCATTTTTCGCAAAGGCTGTTTCTCGTGAAAAATTGTATG
GTATTGGATATATTGATATATTTGAATACCAAAGCATGTTGAAGTatcta
aaaattgtttttaaagatGATTTTTATTGCAATACAGCCAAACAGCTTAC
AACCCTTGATGAGTTCAAGTCTAAAGATTATGAAAAAATGTGTAACACTA
CTAAAGAAAGTATTTTGCAAAGACTgattcaagatttgaaaaaggATTTC
TATTTTAAGGAATCTTACATTGATCTAGTACGTGTTCAGATAGAAAACCT
AAAGACGCTACAAGACAAAGGGTGTCCAAAATCGTATTGGGAGCAGCCAG
ATGCCATTTTTTATGACGAACATATTGAAGAATTTTTAGAAAGTGATAAA
GTGACACTAGTTGTTTctgatgaatttgaaaatgacTTGGAATATGCAAA
TTCATGGATTAATGATTATGCCGGACCACATCTTCACAGAGGTTATAGTT
TCAGTGCTATCGCAAGGTTATCCACAGAAGGCACAGTTGAAGTTATActg
caaaaagaaaaacatatatATGAAAGGAAACGAGATGGATATTTTAGACT
GATGAATGAATTATTTGAATTGGAAACTTTCTTGCAGTCTCCAAAGATAG
TGCGTattggcacaaaaaggaaatacAATCTCagagaacgaaaaagaaaa
taaatcttaTTGTAGAAAATCGTATCTTATCGtagaaaattttcttaatt
catCCAATACCTCACTTTTTCAATTGTTTGAGTGAGATTAGGTAGATAAT
TCATAAAATTGTAGCAAGACCgtaattattttattaatttctaggaattt
ttcaaaattttgataaaaacttaactaaaaatttttttaacatgttTCAT
GTGTTTTACCCTTTCTGGTATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000093-exon-sc0000001-1491911889:1843869..1844294 | TCONS_00000093-exon-sc0000001-1491911889:1843869..1844294 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1510915933:1843869..1844294 | TCONS_00000093-exon-sc0000001-1510915933:1843869..1844294 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1575043694:1843869..1844294 | TCONS_00000093-exon-sc0000001-1575043694:1843869..1844294 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1491911889:1844961..1845538 | TCONS_00000093-exon-sc0000001-1491911889:1844961..1845538 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1510915933:1844961..1845538 | TCONS_00000093-exon-sc0000001-1510915933:1844961..1845538 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1575043694:1844961..1845538 | TCONS_00000093-exon-sc0000001-1575043694:1844961..1845538 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1491911889:1845602..1846692 | TCONS_00000093-exon-sc0000001-1491911889:1845602..1846692 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1510915933:1845602..1846692 | TCONS_00000093-exon-sc0000001-1510915933:1845602..1846692 | Clytia hemisphaerica | exon |
| TCONS_00000093-exon-sc0000001-1575043694:1845602..1846692 | TCONS_00000093-exon-sc0000001-1575043694:1845602..1846692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1843869..1846692 + |
Blast
The following BLAST results are available for this feature:
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