TCONS_00024367-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024367-protein
Unique NameTCONS_00024367-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length455

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024367-protein ID=TCONS_00024367-protein|Name=TCONS_00024367-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
MGVPKCLQMSHRTSFISMIILTLTFFFVEIIVGYATNSMALVADSFHMLS
DVVSLFVGFMALRYSKINKQNGRYTFGWARAEVLGALVNAVFLVALCFSI
FVEALKRIIIPEAIDNAKLVLITGAIGLFVNIIGLFLFHQTGHGHSHGGG
GHGHSHGGGHGHSHQAPKQKHVHANGHSHGDKPLATPLLGKEDNVTMDNG
SVGRDDVDKQVVTLNDQSASSSEESVSSSAPKTSSQLNIRGVYLHVLGDA
LGSVIVMISALIILYANGTWIEYVDPSMSIMLVLIILKTSIPLLKESSMI
LMQTVPTHLKIQEMQDRLIDQIPGVVSVHEFHVWQLAGSKIIASAHVRCN
TLEDYMAIANQLKEFFHNEGIHSTTIQPEFVEKPENLDEIEGNGVVLRDC
VLECDPDCAERMCCTTNSQSENNTTINDKKEIVVVEIEKTLTPTEPQING
NARNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013670XLOC_013670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024367TCONS_00024367Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027470Cation_efflux_CTD
IPR002524Cation_efflux
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008324 cation transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027470Cation efflux protein, cytoplasmic domainGENE3D3.30.70.1350coord: 307..383
e-value: 1.4E-7
score: 31.2
IPR002524Cation efflux proteinTIGRFAMTIGR01297TIGR01297coord: 15..379
e-value: 6.6E-71
score: 236.8
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 16..302
e-value: 1.0E-52
score: 178.7
NoneNo IPR availableGENE3D1.20.1510.10coord: 10..302
e-value: 2.8E-72
score: 242.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..190
NoneNo IPR availableSUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 14..142
coord: 232..303
NoneNo IPR availableSUPERFAMILY160240Cation efflux protein cytoplasmic domain-likecoord: 317..381

Blast
[Close]
BLAST of TCONS_00024367-protein vs. Swiss-Prot (Human)
Match: ZNT10 (Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 3.249e-85
Identity = 156/412 (37.86%), Postives = 233/412 (56.55%), Query Frame = 0 
Query:   18 MIILTLTFFFVEIIVGYATNSMALVADSFHMLSDVVSLFVGFMALRYSKINKQNGRYTFGWARAEVLGALVNAVFLVALCFSIFVEALKRIIIPEAIDNAKLVLITGAIGLFVNIIGLFLFHQTGHGHSHGGGGHGHSHGGGHGHSHQAPKQKHVHANGHSHGDKPLATPLLGKEDNVTMDNGSVGRDDVDKQVVTLN---DQSASSSEESVSSSAPKTSSQLNIRGVYLHVLGDALGSVIVMISALIILYA-------NGTWIEYVDPSMSIMLVLIILKTSIPLLKESSMILMQTVPTHLKIQEMQDRLIDQIPGVVSVHEFHVWQLAGSKIIASAHVRCNTLEDYMAIANQLKEFFHNEGIHSTTIQPEFVEKPENLDEIEGNGVVLRDCVLECDPD-----CAERMCC 414
            M++LT+ FF  E++ GY  NS+AL++DSF+MLSD++SL VG  A   ++   +    T+G+ARAEV+GAL NAVFL ALCF+IFVEA+ R+  PE ID+ +LVLI G +GL VN++GL +F       +    G           +            G     +       G +  VT+   SV R       V  N   D   + +E        K S  LNIRGV LHV+GDALGSV+V+I+A II Y           W  Y+DPS+++++V+IIL ++ PL+KE++ IL+Q VP  + ++E+  +L   +PG+ SVHE H+W+L   KIIA+ H++      Y   + +++E FH+ GIH+ TIQ E V+  E L++        +D +L C+       CA+++CC
Sbjct:   14 MLVLTVAFFVAELVSGYLGNSIALLSDSFNMLSDLISLCVGLSAGYIARRPTRGFSATYGYARAEVVGALSNAVFLTALCFTIFVEAVLRLARPERIDDPELVLIVGVLGLLVNVVGLLIFQDCAAWFACCLRGRSRRLQQRQQLAEGCVPGAFGGPQGAEDPRRAADPTAPGSDSAVTLRGTSVERKREKGATVFANVAGDSFNTQNEPEDMMKKEKKSEALNIRGVLLHVMGDALGSVVVVITA-IIFYVLPLKSEDPCNWQCYIDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGVNMEELMSKL-SAVPGISSVHEVHIWELVSGKIIATLHIKYPKDRGYQDASTKIREIFHHAGIHNVTIQFENVDLKEPLEQ--------KDLLLLCNSPCISKGCAKQLCC 415
The following BLAST results are available for this feature:
BLAST of TCONS_00024367-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNT103.249e-8537.86Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE... [more]
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