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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00023481-protein ID=TCONS_00023481-protein|Name=TCONS_00023481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
IDLMENLEPRRMNLKKMETDARLCSLEEKLSSIQEEMKSLKIKEGKMQAF
SIINKGFEDSKEGNTQGKYEQKKSEEERRNNVENKISQHENQSYAEGLTI
HGLSRIATGGPATRVVWSLLIVTSFIIAIIISKEHWDAFLDHHSQTSTKI
VTQEEMVLPAITICTYEELLVYRRRFIEKGLVGKRPKMIKFSAMDCAKDL
TKCGYNGTTFVKVQNVSADYKHRSLQNDLVVFDNTTNCFTISSQIQKAPS
DVLTARIIAKRVRGINEWSEIYINPSLETFPQASAAVYWAAEGFYHVTVE
KKIIKRLGLPYTDCVRGLGTYEQNKFTGNYTVNKCLKGCIFEEVLIRCGA
IPVMYKKHLRKPVTFDNKTEINETFASSCFNKVEEDNILATKCNSRCRLD
PCHQEEFRLILSQNPVKTENFLELAFTYKSFLLEIVEEIPSYRWQELFSN
FGGCVGLMTGASILSIVELFMFGGIVVTNSYFKIKNKVQSKD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001873 | ENaC |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006814 | sodium ion transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005272 | sodium channel activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006814 |
sodium ion transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005272 |
sodium channel activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 72..92 |
| None | No IPR available | GENE3D | 1.10.287.820 | | coord: 306..402
e-value: 1.4E-5
score: 25.2 |
| None | No IPR available | GENE3D | 1.10.287.770 | | coord: 99..150
e-value: 0.0028
score: 17.5 |
| None | No IPR available | GENE3D | 1.10.287.770 | | coord: 413..479
e-value: 2.2E-11
score: 43.1 |
| None | No IPR available | GENE3D | 2.60.470.10 | | coord: 151..259
e-value: 0.2
score: 10.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 58..80 |
| IPR001873 | Epithelial sodium channel | PFAM | PF00858 | ASC | coord: 269..472
e-value: 3.0E-22
score: 79.1
coord: 94..169
e-value: 8.9E-13
score: 47.9 |
Blast
The following BLAST results are available for this feature:
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