TCONS_00012944-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012944-protein
Unique NameTCONS_00012944-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012944-protein ID=TCONS_00012944-protein|Name=TCONS_00012944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MASAVGRQRGMRKQLSSEDQALNMIAKEAEARLAAKRAARAEARSIRMKE
LERKQKEIDELEGDEIDTVRRKNSSRLNSPSTTSPLGSDVNIASSVDNAV
VKEALKETEDKYKKAMVNVAQLDNERQTLLYQVEILKDIIEDLEEGIHNA
KDELHDKTKEFNKLTHEHENVNTQLDKCTYLLSERERILDEHGINFDGTL
KETEEDEVDGEREESLTNTHHHNGVHDEELEQKFESERLSYQEKIENLEN
EIAELRSNQETNGSRKQAESTRRDLQKQVQELKSQVTRLEQDNARQEGQV
VRLETQVKRYKSQADQAVATEDGLLAEKRKIGRELRQCQEQIKEMETEKE
QLQKRLDKLKIRRGIDTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007272XLOC_007272Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012944TCONS_00012944Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019139LRRFIP1/2
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..64
NoneNo IPR availableCOILSCoilCoilcoord: 98..125
NoneNo IPR availableCOILSCoilCoilcoord: 231..320
NoneNo IPR availableCOILSCoilCoilcoord: 328..362
NoneNo IPR availableCOILSCoilCoilcoord: 133..167
NoneNo IPR availableGENE3D1.20.58.130coord: 226..282
e-value: 1.2E-4
score: 21.6
NoneNo IPR availableGENE3D1.20.5.400coord: 323..364
e-value: 0.15
score: 11.6
NoneNo IPR availableGENE3D1.20.5.190coord: 283..317
e-value: 3.6E-5
score: 23.1
NoneNo IPR availableGENE3D1.10.287.620coord: 10..192
e-value: 1.6E-5
score: 23.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..274
IPR019139Leucine-rich repeat flightless-interacting protein 1/2PFAMPF09738LRRFIPcoord: 29..293
e-value: 3.5E-46
score: 158.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012944-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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