TCONS_00012893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012893-protein
Unique NameTCONS_00012893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1416

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012893-protein ID=TCONS_00012893-protein|Name=TCONS_00012893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1416bp
KTILRSPNQTVEVGSTNSYLCLCRLKRKLYVDPKYADVYLLKDDSIKITI
NRTLSEEIVQKNEEIAELCFDSDEFVYMFPAVKLSDEGFYQCAYHPDGLP
EPVLSEKMKFTVSALEVIFTSKPSQTNEDILKGCSYNSKQDMADFSYLLL
NDTIRINYTTKADAGRTPDFILSSYRFRGRFQCVIFDENRMRKSVYSNYS
DFISLTEPTFLRASLDIIPVRLTGGVQSTFTFPGGCQMTVPKQLKFKPSE
VYWLKNGVKKTFFNLTQLKPVPSKNGFDVIYTFDNKARVVTREVTGVYQC
VADFDGLDTPVIKRTFNVTVKVIEAKFVSNPSWQINKDNIQIQGCKYKAE
NPLYEHAYYLLNGEQKIRIGEINSETPSMFRKDEDGFYHLPPLTINSFDR
LGTYECVITHALLEGQTISTASADLMTLKESDVLPTFKSHPTSAHSNTTG
GVVQISGCIYHTKIPLSRSEQVFYLFNSVKKLGVPFPVLGAGDRGGGIDR
STTGVDEDSGFDPDRPLPREEREGGDFFRPSPDMRMIDYRKSTSSYEDQG
FYQCGVTIGSGPYQKTILSNSVDVQFVDVASAKMNVRLDQQWDKDLANSS
SETFKKLEKQLVEDIEKILSEENEVKPLVRILGFKSGSVIADTQVLYPNV
TQTSRRQKCKELQQSLKDGVKNSQTFKVTSVDVNSLDCCSEDLEGEESFK
GVERFPETLVSQSVTNNCTYKQSASSQRQCLGNMKDGPKWSNVNLQNCPA
KSPITNSLIELSLKKICTPSTLTDCQTPVEVSGNLSQLINRTDSITTRQD
LEYISIVLQNLAIHPTAFLPNDTDNAKTIVANVLETVGNVIGSNRTIVAQ
AQKAKQTSSNILKSLDVIAENLGQIAAFFNINGTIQIKFENPYVALAVTY
TEPKPLKIFGGFDSDRSISVNIAAREDKPTYYNNKTLEILASSHIPKEAF
RNKSQIVYSFLFQDDTLFLTGKQIKALDAGQPIVSPLSSQILAVTIGKDK
LENLSIPILLKFEKIHQPVIGTEENSFFNNTCTFWEVQQVGLWSSRGCWK
INETETQISCECNHLTNFAILLDVTGKQSNPLELRIMTWIGCGISLAGLF
LTLLSYTIFKKLHKKLPPKILISLALSLFILLIVFLVGAERGSVVTSKLG
CQIVAGILHYFMLTTFLWMLIEAINLYRNFVKIFRSGGDGKFFKNSSRIA
WGIPLLIVVINGAVEPDNLGNDQFCVILGNSFYFALLLPVALILFINFIV
LIMVLRSLSKNQGSKITSTQKQSLATQTRITLACATLLGLTWLFALLAVG
DLSYTFQLLFTIFNSLQGFFIFVFYTLLNTDVQKEWKRLFKIKDKEQGNS
SQPVVSTLNREKYHVKSSPTVGIYGNSDTPPAEEIDLSSSTGHLIKQRQH
YTNPTYDQTDNSSFKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007234XLOC_007234Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012893TCONS_00012893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR000082SEA_dom
IPR013783Ig-like_fold
IPR007110Ig-like_dom
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 604..624
NoneNo IPR availableGENE3D1.20.1070.10coord: 1075..1366
e-value: 1.7E-41
score: 141.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1397..1416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..533
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 1065..1345
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 1307..1328
score: 31.66
coord: 1234..1259
score: 29.07
coord: 1086..1110
score: 24.81
coord: 1277..1297
score: 23.81
coord: 1153..1176
score: 31.43
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 1083..1321
e-value: 1.2E-40
score: 139.3
IPR000203GPS motifSMARTSM00303GPS_3coord: 1028..1077
e-value: 4.4E-9
score: 46.2
IPR000203GPS motifPFAMPF01825GPScoord: 1031..1071
e-value: 1.1E-11
score: 45.1
IPR000203GPS motifPROSITEPS50221GPScoord: 1029..1077
score: 15.123
IPR000082SEA domainPFAMPF01390SEAcoord: 587..674
e-value: 7.9E-7
score: 29.2
IPR000082SEA domainGENE3D3.30.70.960coord: 579..690
e-value: 7.7E-11
score: 41.6
IPR000082SEA domainSUPERFAMILY82671SEA domaincoord: 590..687
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..132
e-value: 0.021
score: 14.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 227..330
e-value: 0.0013
score: 18.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 208..319
score: 6.724
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 1084..1329
score: 32.779

Blast
[Close]
BLAST of TCONS_00012893-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 7.114e-54
Identity = 141/418 (33.73%), Postives = 226/418 (54.07%), Query Frame = 0 
Query:  939 ILASSHIPKE-----AFRNKSQIVYSFLFQDDTLFLTGKQIKALDAGQPIVSPLSSQILAVTIGKDK-LENLSIPILLKFEKIHQPVIGTEENSFFNNTCTFWEVQQ---VGLWSSRGCWKINETETQIS-CECNHLTNFAILLDV---TGKQSNPLELRIMTWIGCGISLAGLFLTLLSYTIFKKLHKKLPPKILISLALSLFILLIVFLVGAERGSVVTSKLGCQIVAGI-LHYFMLTTFLWMLIEAINLYRNFVKIFRSGGDGKFFKNSSRIAWGIPLLIVVINGAVEPDNLGN----DQFCVILGNS-FYFALLLPVALILFINFIVLIMVLRSLSKNQGSKITSTQKQSLATQTRITLACATLLGLTWLFALLAVGDLSYTFQLLFTIFNSLQGFFIFVFYTLLNTDVQKEWK 1337
            ILAS ++PK         N   I+++F F   +LF T    KAL          ++ +++ +I  D  ++NL+ P+++  + I     G  +N +    C FW+ +    +G W+S GC K+ ET    + C+C+HLT+F +L+D+   T    N   L ++T+ GCGIS   L + +++Y  F KL K  P KILI+L  +L +L +VFL+ +   S    K+G  I A + LHYF+L +F WM +EA+++Y   VK+F         K    + WGIP ++V I  +V+ D  G       FC I  +S FY +++    LI  +N  +   VL  L+  + S+I  T+++ +    + T++   LLGLTW FA  A G +   F  LF IFN+LQGFFIFVF+ ++   V+++W+
Sbjct: 2603 ILASIYLPKSLTERIPLSNLQTILFNF-FGQTSLFKTKNVTKAL----------TTYVVSASISDDMFIQNLADPVVITLQHI-----GGNQN-YGQVHCAFWDFENNNGLGGWNSSGC-KVKETNVNYTICQCDHLTHFGVLMDLSRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSF--QKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNYILKFC-LVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSVK-SQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQ 2998
The following BLAST results are available for this feature:
BLAST of TCONS_00012893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG47.114e-5433.73Adhesion G-protein coupled receptor G4 OS=Homo sap... [more]
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