TCONS_00011670-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011670-protein
Unique NameTCONS_00011670-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length396

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011670-protein ID=TCONS_00011670-protein|Name=TCONS_00011670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MSSNEKIVVIDVTSLQECTAETLKCSEKIKAESTQKCDENSTECKPTFNE
LSTTKNEDFEECKENRGCQQDRNGSFKFSTTTYCGTCRKVLEADLVDGQC
EKCNRNIMHELSKDDTVSQLQISVDNLDGCSEQPSPAKSTTTIISATASE
RTCRICLDNIDQGDLIAPCKCSGSTKYAHESCMLKWFFKSSKKSCEVCLG
NVNVKPIGFKPFQEWRLPDSGCDFIVYLFGLYFLIMIVFTGMITWIATQG
CIAPVCVTLYTVCAVAVFYFFYCCGCVEYSRRYWRALLSVNKVWRIYGRA
DSLKNFKHQVKKGDCKTPTNNILTSNKNEPFVINIETKLTAPIEVCAEAS
SSSLQEDNNNLNAVPDDSMGIDNVAMEIEDMECACANNQDGSKAIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006548XLOC_006548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011670TCONS_00011670Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 152..199
e-value: 1.0E-16
score: 71.6
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 153..198
e-value: 1.2E-13
score: 50.9
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 145..205
score: 18.956
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 146..205
e-value: 2.3E-17
score: 62.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 149..199

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011670-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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