TCONS_00010947-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010947-protein
Unique NameTCONS_00010947-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010947-protein ID=TCONS_00010947-protein|Name=TCONS_00010947-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MGQLPKFSLEGDRYDQSTYWGRLQRCFDVVDPRTLFVTKEGLNHSLDLLK
NFQEGKNPANITNEELWEARKIKEAIVHPDTGENILMPFRMSGYVPFGTF
TVIGMLIPGASVPKVIFWQWLNQTHNACVNYSNRNATKPTPMSKFIQSYV
GAVGSALTIAVGISMGIRKTSLLSANAKLLASRFVAYPATSTANIANVYL
MRQNELQQGIDVYDDKGNTVGTSKAAAKKAVFETALSRVILPAPILIFPP
VIMAMLEKTKFMMRRPGLSLPINAVVCTLAFGIALPFAIALFPQQTKMER
GKLEEDLASKTTSEFVYFNKGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006152XLOC_006152Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010947TCONS_00010947Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004686Mtc
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015075ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0015075 ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004686Tricarboxylate/iron carrierPFAMPF03820Mtccoord: 14..322
e-value: 1.1E-118
score: 395.8
IPR004686Tricarboxylate/iron carrierTIGRFAMTIGR00798TIGR00798coord: 5..322
e-value: 4.3E-111
score: 368.8

Blast
[Close]
BLAST of TCONS_00010947-protein vs. Swiss-Prot (Human)
Match: SFXN5 (Sideroflexin-5 OS=Homo sapiens GN=SFXN5 PE=1 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 4.289e-135
Identity = 171/318 (53.77%), Postives = 240/318 (75.47%), Query Frame = 0 
Query:    5 PKFSLEGDRYDQSTYWGRLQRCFDVVDPRTLFVTKEGLNHSLDLLKNFQEGKNPANITNEELWEARKIKEAIVHPDTGENILMPFRMSGYVPFGTFTVIGMLIPGASVPKVIFWQWLNQTHNACVNYSNRNATKPTPMSKFIQSYVGAVGSALTIAVGISMGIRKTSLLSANAKLLASRFVAYPATSTANIANVYLMRQNELQQGIDVYDDKGNTVGTSKAAAKKAVFETALSRVILPAPILIFPPVIMAMLEKTKFMMRRPGLSLPINAVVCTLAFGIALPFAIALFPQQTKMERGKLEEDLASKTTSEFVYFNKGL 322
            P F L   R+ Q++++GR +   D++DPRTLFVT+  L  ++ LL++++ G     +TNE+LW A+KIK+AI+HPDT E I MPFRMSGY+PFGT  V+G+L+P  ++   +FWQWLNQ+HNACVNY+NRNATKP+P SKFIQ Y+GAV SA++IAVG+++ ++K +  +   +LL  RFV +PA ++ANI NV LMR  EL++GIDV D  GN VG+SK AA+ A+ ETAL+RV+LP PIL+ PP++M+MLEKT  +  RP L LP+ ++VC  AFG+ALP AI+LFPQ +++E  +LE ++A  T+S  V +NKGL
Sbjct:   23 PPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRLREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVGLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL 340
The following BLAST results are available for this feature:
BLAST of TCONS_00010947-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SFXN54.289e-13553.77Sideroflexin-5 OS=Homo sapiens GN=SFXN5 PE=1 SV=1[more]
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