TCONS_00010522-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010522-protein
Unique NameTCONS_00010522-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length928

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010522-protein ID=TCONS_00010522-protein|Name=TCONS_00010522-protein|organism=Clytia hemisphaerica|type=polypeptide|length=928bp
MLRIVASLHDICQYLCAHARSGSSHARMGSHKLETSSITADWGGTEGIGA
ELREIQKQIDKLENPFDPDDVATFLKRKRDIIFMEYDVTISHSVRNTFLQ
SGNQTAYQSITNCMKSALQDLSNRSREIYANNRLSVPDPLEPSDSIAKTL
FPWRSFLGRYVSNPMSFFDLSYVMQIPLFELKNIDKHLVHGEILGVSLLL
EDVVSTGIPKVSFTEPQGSSNTDLMKRPPNSRISSRPPSSRSRSSSKMSN
PTIESPKKSFLTTSFNMEKFAGHAGLSWQHYPMQTSEVVYNFLLLWSRLE
IVRREWGCRRLKITSLSTVKSYDQFQHLYNLEILQPVYHRILTSREGSSN
KQNRTRLRVAGDEEISLVELPDDVTEYEIKGRQLVRLLEHFECMMIDDCI
RRISRQHTAVVSERHRDDHNMPTDLWKRPSMKENVTIPRAHLVEDFAREL
LADSSSNDNLVTLERDSLDHSLVTLATAITNREKMNFLSCSMFYENLLRQ
QNNALYTKERHIKRLEDTIEQLESKTSVEIDCALAERSYELLIEITALRS
KIADLEKWNNESEMKLDERYRQSYNDMVLDLFQNAFGMKMRFENFRLKLH
DDVMDFVQEVRKISVDKLQKVRNKHGYQPSNDNMSARLIQAEKIREVQRE
NKKLTDIVSKQRTMHTWFRSKSRSKFELMSADFQSNTDKATKENLEKEML
QEQKSSLMKEEQEALKKILINLDQECSKLRQQLDKEHKIQAQRSHLQLKE
EQSSRHLEMARASNLDKLLQELEEREKELKQMRDSQSPDNKQSARSSSET
KRLLRQAITQVSHERSLKLDAFERVDELQKHVSELENRITDMLSKEKQTF
HETCFPMVPGGRTSPQKLRPISQAANIALAVEPPQRPRTSRTRPKSGVPA
RVTPRSKSVMELLKQQKSCSSLNKNFHY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005903XLOC_005903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010522TCONS_00010522Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 690..732
NoneNo IPR availableCOILSCoilCoilcoord: 818..845
NoneNo IPR availableCOILSCoilCoilcoord: 762..785
NoneNo IPR availableCOILSCoilCoilcoord: 505..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 776..810
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 883..906
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..257

Blast
BLAST of TCONS_00010522-protein vs. Swiss-Prot (Human)
Match: CC162 (Coiled-coil domain-containing protein 162 OS=Homo sapiens GN=CCDC162P PE=2 SV=3)

HSP 1 Score: 370.548 bits (950), Expect = 9.138e-114
Identity = 250/847 (29.52%), Postives = 454/847 (53.60%), Query Frame = 0
Query:    2 LRIVASLHDICQYLCAHARSGSSHARMGSHKLETSSITADWGGTEGIGAELREIQKQIDKLENPFDPDDVATFLKRKRDIIFMEYDVTISHSVRNTFLQSGNQTAYQSITNCMKSALQDLSNRSREIYANNRLSVPDPLEPSDSIAKTLFPWRSFL---GRYVSNPMSFFDLSYVMQIPLFELKNIDKHLVHGEILGVSLLLEDVVSTGIPKVSFTEPQGSSNTDLMKRPPNSRISSRPPSSRSRSSSKMSNPTIESPKKSFLTTSFNMEKFAGHAGLSWQHYPMQTSEVVYNFLLLWSRLEIVRREWGCRRLKITSLSTVKSYDQFQHLYNLEILQPVYHRILTSREGSSNKQNRTRLRVAGDEEISLVELPDDVTEYEIKGRQLVRLLEHFECMMIDDCIRRISRQHTAVVSERHRDDHNMPTDLWKRPSMKENVTIPRAHLVEDFARELLADSSSNDNL-VTLERDSLDHSLVTLATAITNREKMNFLSCSMFYENLLRQQNNALYTKERHIKRLEDTIEQLESKTSVEIDCALAERSYELLIEITALRSKIADLEKWNNESEMKLDERYRQSYNDMVLDLFQNAFGMKMRFENFRLKLHDDVMDFVQEVRKISVDKLQKVRNKHGYQPSNDNMSARLIQAEKIREVQRENKKLTDIVSKQRTMHTWFRSKSRSKFELMSADFQSNTDKATKENLEKEMLQEQKSSLMKEEQEALKKILINLDQECSKLRQQLDKEHKIQAQRSHLQLKEEQSSRHLEMARASNLDKLLQELEEREKELKQMRDSQSPDNKQSARSSSETKRLLRQAITQVSHERSLKLDAFERVDELQKHVSELENRITDMLS 844
            L+++A LHDI  YL + A+ G+  A     +   + +  DWGGTEGIG+EL+E+Q  ID L++P DP  VA  L  +R++IF+++D  + H +R TFL +GN  AYQS+T+ M   L  LSN  R+    ++LS+P PL+P    A  LFPWR+FL   G +     S   L Y MQ+ L  L + D+ + HGE++GV LLLEDV+S+    V+   PQ    T      P+    S+ P  RS+  S        SPK S L            A +S+         ++ +FL+LW +LE+++  WG  +L+   +++V  + +F  LY  ++L P    I  +R+    K++     +  ++    V  P   +E EIK  QL +LLE+ E  MI + +R+++R+ T V+SE+ +++ ++PTDLWK   MKEN ++ R  +VE F + L+  +  +D + +T  +D L+  L++L   +  RE  NF + SM YE++L      L  KE+ +   +      E          +AE S+++++EIT LR+++ DLE+ N   + ++ +  ++ Y  +V  LF+    +K + ++ +L L   V + + EVR   +D ++ ++ K      ++ M     + E++  ++++N  L ++V K R++  W  +  ++ F+   +  +  + ++ KE L  +++ E++  L +++  AL++ L     + +++ +Q D + ++  +  H   +E  + + L   + S ++KLL+++ ++E++L+ +       +K       + KR L Q  ++++ ERS+KLDA +R +ELQ  + + +     M S
Sbjct:   18 LQLIAPLHDIVAYLVSFAKLGNCPACFEFPR-SPNPLRGDWGGTEGIGSELQELQNMIDSLQSPQDPIRVAQALLLRREVIFLQFDAAVRHLIRRTFLAAGNVPAYQSVTDGMCHGLPALSNSLRKSIFASQLSLPQPLDPRSLQAFELFPWRAFLEDGGPFPVMSNSPDTLEYNMQLCLCGLSDRDRKVAHGELVGVQLLLEDVLSSY--HVTMEAPQRQQATLGKNTQPD---WSKVPGFRSQFRS--------SPKTSELLEGL------CDAVMSF--------ALLRSFLILWKQLEVLKEHWGRLKLQGQDINSVSLHKRFSELYETDVLYPSMKAI--ARQ--MGKEDEFEGFIVNNQS---VLPPSGASEVEIKTHQLQKLLENCEIQMIQEVLRKVNREMTLVLSEKCKEECSLPTDLWKHQVMKENFSVSRPQIVEKFIQRLM--NYQDDGVEITFRKDHLEACLLSLGCDVMARECSNFETYSMCYEHVLHHARQRLSQKEQELDATQRGQGPPEDSAG-----QIAELSHDMIMEITTLRAQLTDLEEVNLNLKKQIRKEVQEEYEALVRALFETCLHIKEKLDDNQLNLIQKVCELIGEVRTEGIDNMKDLKKKWCSASPDEGMKENPAK-EQLWALEQDNCSLANLVCKVRSLGRWRLAVQQACFQAQLSRTEKESIQSKKEYLRIKLMAEREVGLFRQQVLALRQALARAQADSARMWKQQDSQAQLLKELEHRVTQEALTQQQLHFMKTSRMEKLLEDVGQKEQQLQLLSKEAERASKLGQLQQKKMKRDLHQMRSRLAQERSVKLDALQRAEELQGQLHDAQRSAVPMGS 821          
The following BLAST results are available for this feature:
BLAST of TCONS_00010522-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1629.138e-11429.52Coiled-coil domain-containing protein 162 OS=Homo ... [more]
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