TCONS_00009640-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009640-protein
Unique Name	TCONS_00009640-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	707

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009640-protein ID=TCONS_00009640-protein|Name=TCONS_00009640-protein|organism=Clytia hemisphaerica|type=polypeptide|length=707bp
MQNLLSPDTSLCFKENEFSDRNFNVDKFVAKCKDRVPMSKLREDLEAHYK
NIQHALVELINRDYADFVSLSSNLIGTDKTIGNLCGPLDQFKEQVLAIQK
DLKGALDVVEKKLEQRRKVREKKSCLHHLITVVHSVEKIEKTLTADLKSP
DMEIFMHEDKTHPGHVLERVAGEFNQLQFHVNQSKGHPIIESIKPRVALI
TSKLQENLETTFEQGISSKDSELISRCLRTYALIDKTSHAEEMFKHLVVK
PFVDEVISETYLDQHGLEQICADLLKFVEDECQIMIELTSAEMLKNDVTV
ATATQDADGNKGHTVKGFDFLVNSVWVEIAQAFEENLPLIFSPGNPDSFL
ARYKTMMRFMDNFEEQCMTPECFKALRSHPGYHSFMVKWSLPVYFQIRFQ
DIGGEIEMSVDRPNEKSPEDLFMTNIVGTCWNSIKRCWCDEVYIAPLKGR
FWKLTLQISNRLCIFLKNISEKKDEKERITIENMTSLLGDSSYFSKKFGD
YFKESIVSKLNDSASPVNLKGCKDSVDECIASLHIACDGLCLYMVNRLSD
EGIVQLENVNNVPRLFRRTNKEPPTTPSSYVQLAFQSLESFKSTSSTLDV
KYQKKITEDTAHTMLSKFYNSVNELLTSIKKTEDSLLRLKQQRMAAAGQS
SPILANKASEASDEDKIRKQLLLDAQEFGVQMEKLGLSLENEEYKKLKDV
TEKSLQK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005378	XLOC_005378	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009640	TCONS_00009640	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024602	COG_su2_N
IPR024603	COG_complex_COG2_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 622..642
None	No IPR available	COILS	Coil	Coil	coord: 42..62
IPR024602	Conserved oligomeric Golgi complex, subunit 2, N-terminal	PFAM	PF06148	COG2	coord: 11..142 e-value: 5.5E-34 score: 117.0
IPR024603	COG complex component, COG2, C-terminal	PFAM	PF12022	DUF3510	coord: 548..674 e-value: 5.5E-32 score: 110.7

Blast

[Close]

BLAST of TCONS_00009640-protein vs. Swiss-Prot (Human)
Match: COG2 (Conserved oligomeric Golgi complex subunit 2 OS=Homo sapiens GN=COG2 PE=1 SV=1)

HSP 1 Score: 472.241 bits (1214), Expect = 3.491e-157
Identity = 281/736 (38.18%), Postives = 415/736 (56.39%), Query Frame = 0

Query:    6 SPDTSLCFKENEFSDRNFNVDKFVAKCKDRVPMSKLREDLEAHYKNIQHALVELINRDYADFVSLSSNLIGTDKTIGNLCGPLDQFKEQVLAIQKDLKGALDVVEKKLEQRRKVREKKSCLHHLITVVHSVEKIEKTLTADLKSPDMEIFMHEDKTHPGHVLERVAGEFNQLQFHVNQSKGHPIIESIKPRVALITSKLQENLETTFEQGISSKDSELISRCLRTYALIDKTSHAEEMFKHLVVKPFVDEVISETYLDQH--GLEQICADLLKFVEDECQIMIELTSAEMLKNDVTVATATQDADGNKGHTVKGFDFLVNSVWVEIAQAFEENLPLIFSPGNPDSFLARYKTMMRFMDNFEEQCMTPECFKALRSHPGYHSFMVKWSLPVYFQIRFQDIGGEIEMSV-----DRPNEKSPEDLFMTNIVGTCWNSIKRCWCDEVYIAPLKGRFWKLTLQISNRLCIFLKNISEKKDEKE-------------------------------------RITIENMTSLLGDSSYFSKKFGDYFKESIVSKL------NDSASPVNLKGCKDSVDECIASLHIACDGLCLYMVNRLSDEGIVQLENVNNVPRLFRRTNKEPPTTPSSYVQLAFQSLESFKSTSSTLDVKYQKKITEDTAHTMLS----KFYNSVNELLTSIKKTEDSLLRLKQQRMAAAGQSSPILANKASEASDEDKIRKQLLLDAQEFGVQMEKLGL 687
             PDT LCF ++EF   +F+VD FV+ C+ RV + +LR+DLE +YK ++ A+VELIN+DYADFV+LS+NL+G DK +  L  PL Q +E+VL+++  +   +  V++++ ++  +R+KK C+  LI V+ SVEKIEK L +   S +            G +LER+A EFNQLQFH  QSKG P+++ ++PR+A IT+ LQ++LE    +G+ + D ++I  CLRTYA IDKT  AE +   ++VKP++DEVI E +++ H  GL+ +   LL+FV   C+++ E+T   +                 KG+TV G+DFLVNSVW +I Q  EE LP +F+PGNPD+F  +Y   M F+   E QC +    K LR+HP YHSF  KW+LPVYFQIRF++I G +E ++     D P E SP  L  ++     W+S++RCW DE+++  L  R W+LTLQI  R  +F+  +S +    E                                      I+   +  ++ D     ++  +   E I  KL      N S+    L+  + S   C+ SL          ++  LSD     L++   VPRL+RRTNKE PTT SSYV  A + L  F+  S   D K ++ I +      LS    K+Y +V+++L S+KK E+SL RLKQ R      ++P+    +   SD+DKIR QL LD +  G Q++KLGL
Sbjct:   11 GPDT-LCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQ-SSKETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAI--------------SSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAE-SPYCLLASH---RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVTGSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELL-EIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPSLSSK-------IIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPL--FQLQSGHKD-KLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTP--ANPV--GPSGGMSDDDKIRLQLALDVEYLGEQIQKLGL 711

The following BLAST results are available for this feature:

BLAST of TCONS_00009640-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009640-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
COG2	3.491e-157	38.18	Conserved oligomeric Golgi complex subunit 2 OS=Ho...	[more]

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TCONS_00009640-protein (polypeptide) - C. hemisphaerica