TCONS_00009317-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009317-protein
Unique NameTCONS_00009317-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009317-protein ID=TCONS_00009317-protein|Name=TCONS_00009317-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
MSKAPPTASKRLLKELSELSKNPVEGLEFDADKIASNLTKWHVILNGAAG
TLYSGEKFELQFTFGDKYPFDSPQVIFIGKHIPVHPHIYTNGHICLSILT
DDWTPAMSVSSVCLSIVSMLSSCKKKELPPDNNSYVKTASSNPKKTRWWF
HDDTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005209XLOC_005209Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009317TCONS_00009317Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 10..155
e-value: 2.0E-34
score: 130.3
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 11..143
e-value: 8.6E-34
score: 116.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 10..122
score: 26.376
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 9..123
e-value: 1.47896E-40
score: 133.867
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..147
e-value: 1.9E-42
score: 145.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..122

Blast
[Close]
BLAST of TCONS_00009317-protein vs. Swiss-Prot (Human)
Match: UBE2W (Ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.244e-70
Identity = 90/149 (60.40%), Postives = 117/149 (78.52%), Query Frame = 0 
Query:    7 TASKRLLKELSELSKNPVEGLEFDADKIASNLTKWHVILNGAAGTLYSGEKFELQFTFGDKYPFDSPQVIFIGKHIPVHPHIYTNGHICLSILTDDWTPAMSVSSVCLSIVSMLSSCKKKELPPDNNSYVKTASSNPKKTRWWFHDDTV 155
            +  KRL KEL  L  +P  G+  +   + +++T+W V + GA GTLY GEKF+L F F  +YPFDSPQV+F G++IPVHPH+Y+NGHICLSILT+DW+PA+SV SVCLSI+SMLSSCK+K  PPDN+ YV+T + NPKKT+WW+HDDT 
Sbjct:    3 SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 151
The following BLAST results are available for this feature:
BLAST of TCONS_00009317-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBE2W8.244e-7060.40Ubiquitin-conjugating enzyme E2 W OS=Homo sapiens ... [more]
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