TCONS_00007997-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007997-protein
Unique Name	TCONS_00007997-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	580

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007997-protein ID=TCONS_00007997-protein|Name=TCONS_00007997-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
MASAKLRRKTHHNEDKFLSPERTRTIKPADFKNHKQLKDLSHDDLIELLC
LMEAELQAKDVLLKAVLSSDTGHALPLSHLLNDVDLAHVDNQAEDKSYLL
QGEEEDEVWLGEPSAHLNHVVAYHQVVREQMQTTVQDLQKVHKEVVEKLD
EEYHKHAADTAQGDDVTYMLEKERERLQAQIDQEQTKYADLEKERDSLRE
TLEKERKDYYNAFNELMNDCKALAQQLVTQSSKYEKNQKDHDKHQKDIDK
EKSKNKVLSELMVEETQKFKERLRQYEEEVRDFHVLEQKKTDLECKLLNS
DKQMKEYYHQLNDERKKNSALAYELNQLRKKYQGEFTPEDDTHEDVLFMQ
DQYEIPVKEARTSTIQLSKPDRDSPEPSTVLPPAVPVQAKVATVTKSSSI
RQTKNYSPQVNKSNNIVPLNNHASNNQRLNSSYVQAPDAQQIKRHSYEEK
SNYNNSREEASVKRNSYEGALNLTGTPETSRTASLNKKPSSYEDMRNVGG
AAALSVTPKRNSYEGDSKKIPPPAPPRRGSQLTPQDRPPIVKIXAWLSID
APGSTTHRQDTPTVSTEEIQQFNALSHRCL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004507	XLOC_004507	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007997	TCONS_00007997	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019131	Cortactin-binding_p2_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 234..254
None	No IPR available	COILS	Coil	Coil	coord: 167..219
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	COILS	Coil	Coil	coord: 311..331
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	GENE3D	1.20.1170.10		coord: 81..465 e-value: 2.0E-8 score: 33.0
IPR019131	Cortactin-binding protein-2, N-terminal	PFAM	PF09727	CortBP2	coord: 37..221 e-value: 4.5E-31 score: 108.1

Blast

[Close]

BLAST of TCONS_00007997-protein vs. Swiss-Prot (Human)
Match: CT2NL (CTTNBP2 N-terminal-like protein OS=Homo sapiens GN=CTTNBP2NL PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.981e-20
Identity = 74/260 (28.46%), Postives = 131/260 (50.38%), Query Frame = 0

Query:   37 LKDLSHDDLIELLCLMEAELQAKDVLLKAVLSSDTGHAL-----------PLSHLLNDVDLAHVDNQAEDKSYLLQGEEEDEVWLGEPSAHLNHVVAYHQVVREQMQTTVQDLQKVHKEVVEKLDEEYHKHAADTAQGDDVTYMLEKERERLQAQIDQEQTKYADLEKERDSLRETLEKERKDYYNAFNELMNDCKALAQQLVTQSSKYEKNQKDHDKHQKDIDKEKSKNKVLSELMVEETQKFKERLRQYEEEVRDFHV 285
            L+ LS  +L+ L  ++E EL+A+D++++A+ +      +           PL  L  D +     N  E +                P + L  V+   + ++E+M + +   +  H++V+  L+EE  +HA DTA+GDDVTYMLEKERERL  Q++ E+++    EKE+  L   LE+ER  +    + L+ +CK    +        E+ QK  +   K ++KEKS+   L E +  E ++  +   Q E+++ +F +
Sbjct:    3 LEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTN-----------PLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATNKAA------EEGQKAGELSLK-LEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDI 244

The following BLAST results are available for this feature:

BLAST of TCONS_00007997-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007997-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CT2NL	1.981e-20	28.46	CTTNBP2 N-terminal-like protein OS=Homo sapiens GN...	[more]

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TCONS_00007997-protein (polypeptide) - C. hemisphaerica