TCONS_00007517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007517-protein
Unique NameTCONS_00007517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007517-protein ID=TCONS_00007517-protein|Name=TCONS_00007517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
GWMVFTYRMIGQHDWNADWETFKNGFGEHPGDFYIGNEILHKITTSGDYE
FSYVTERLPSGETYQGWQEIFRIESETDLYRLRLEGSTDGTMSRLANHNN
MAFSTKLLDNDDDSNIDCSKFRHSGFWWNKCGQFNPHGIFHGDRKETCMG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004247XLOC_004247Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007517TCONS_00007517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 1..146
e-value: 7.0E-7
score: -46.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 1..146
e-value: 3.2E-26
score: 92.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..150
score: 20.447
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 1..144
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 104..149
e-value: 1.2E-10
score: 40.8
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..103
e-value: 1.3E-24
score: 86.7

Blast
[Close]
BLAST of TCONS_00007517-protein vs. Swiss-Prot (Human)
Match: TENX (Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=4)

HSP 1 Score: 88.9669 bits (219), Expect = 2.563e-21
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 0 
Query:    1 GWMVFTYRMIGQHDWNADWETFKNGFGEHPGDFYIGNEILHKITTSGDYEFSYVTERLPSGETYQGWQEIFRIESETDLYRLRLEGSTDGTMSRLANHNNMAFSTKLLDNDDDS-NIDCSKFRHSGFWWNKCGQFNPHGIF 140
            GW+VF  RM GQ D+  DWE + +GFG   G+F++GNE LH +T +GDY  S   +     E      + F ++S  + YRL LEG        ++ H+   FS +  D D +S  I C+      +W+  C   N +G++
Sbjct: 4066 GWLVFQRRMDGQTDFWRDWEDYAHGFGNISGEFWLGNEALHSLTQAGDY--SMRVDLRAGDEAVFAQYDSFHVDSAAEYYRLHLEGYHGTAGDSMSYHSGSVFSAR--DRDPNSLLISCAVSYRGAWWYRNCHYANLNGLY 4202
The following BLAST results are available for this feature:
BLAST of TCONS_00007517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENX2.563e-2134.04Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=4[more]
back to top