TCONS_00006216-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006216-protein
Unique NameTCONS_00006216-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006216-protein ID=TCONS_00006216-protein|Name=TCONS_00006216-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MYLEMDASYALPSSSIFQELQRIHDTGFFSPVHSLEDKFQQNRLEMDRYL
GDEPNSRNNGLSGKQDGSTVAWNEFLVPDEMDNDVNGLSYDLELLAPYFD
MYNMTNKVQVVLPETPTSDLDFPVFKRNNATKFSFNHTQNIETSLYSDHA
LIVKPVILTPPSSPESVSSGGSGNTSPRGLKPTKGQRIQKRGSGGGGGGP
NHAAKLLDSITLNPDNSLNLADLANLDSKKRIHRCQFNGCRKVYTKSSHL
KAHQRTHTGEKPYKCTWEGCHWRFARSDELTRHYRKHTGAKPFKCSACDR
CFSRSDHLALHMKRHGNVNSLQHKSNSVNNNLNNTTKNQILNNTAQNNPT
KLLSSPMNHSKLTLTAAATAAVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003562XLOC_003562Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006216TCONS_00006216Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 293..315
e-value: 0.0059
score: 25.8
coord: 263..287
e-value: 7.1E-5
score: 32.2
coord: 233..257
e-value: 0.043
score: 22.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 295..315
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 265..287
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 235..257
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 263..292
score: 13.858
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 293..320
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 233..262
score: 15.126
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 280..317
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 247..291
NoneNo IPR availableGENE3D3.30.160.60coord: 302..328
e-value: 1.4E-6
score: 27.7
NoneNo IPR availableGENE3D3.30.160.60coord: 261..279
e-value: 2.8E-14
score: 52.5
NoneNo IPR availableGENE3D3.30.160.60coord: 244..260
e-value: 4.6E-9
score: 36.0
NoneNo IPR availableGENE3D3.30.160.60coord: 7..243
e-value: 7.6E-6
score: 25.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 233..257
e-value: 0.0033
score: 17.7
coord: 293..315
e-value: 1.4E-4
score: 22.0
coord: 263..287
e-value: 1.7E-4
score: 21.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..202
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 280..301
e-value: 4.3E-12
score: 45.7

Blast
[Close]
BLAST of TCONS_00006216-protein vs. Swiss-Prot (Human)
Match: KLF7 (Krueppel-like factor 7 OS=Homo sapiens GN=KLF7 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.187e-59
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0 
Query:  227 DSKKRIHRCQFNGCRKVYTKSSHLKAHQRTHTGEKPYKCTWEGCHWRFARSDELTRHYRKHTGAKPFKCSACDRCFSRSDHLALHMKRH 315
            ++KKR+HRCQFNGCRKVYTKSSHLKAHQRTHTGEKPYKC+WEGC WRFARSDELTRHYRKHTGAKPFKC+ CDRCFSRSDHLALHMKRH
Sbjct:  213 ENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRH 301
The following BLAST results are available for this feature:
BLAST of TCONS_00006216-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLF73.187e-5992.13Krueppel-like factor 7 OS=Homo sapiens GN=KLF7 PE=... [more]
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