TCONS_00004470-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004470-protein
Unique NameTCONS_00004470-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length472

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004470-protein ID=TCONS_00004470-protein|Name=TCONS_00004470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MFNPWRDQGFPRSQDNVTYQRYIFARKRFRNMVKRAKNQANVDHFINVDN
LKNLDPRSYWKSIKVNKASTQKLFTINGKTTSSEITTEFHNHFENLLNTP
RTQNIDNTKSRTRLQELLTTLERSTSTDFYISECDVKQAILSLSKNKTRD
PFNLRAEHYIHASNDVFIQHITELINKLFQTSTIPSALCTSLIIPLVKNH
KKPLSDPNNYRGISIIPIITKIAELVIIKKCPNIKNNNPSQFGFVNGSST
IHAEILIQDTIHYYNKNDSPVYVCSLDAEKAFDCCNWQVLFEKLSVREDI
PNEILKFLIKLYLNSESAIMYNGHKTKSFNLSQGVRQGSLLSPYLYNFYT
EDLLAKIKDLKIGATLGNGLNTSIIAYADDLILLSPTLRSLQVMIDKCIE
YGQEHGLKFNHSKTQFCISGKCQLPKPTLTMYNTQILPKQQLEHLGLRWK
TERNLTITKMYVYLNFGPLLPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002517XLOC_002517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004470TCONS_00004470Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 201..446
e-value: 4.6E-36
score: 124.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 177..436
score: 18.941
NoneNo IPR availableGENE3D3.30.70.270coord: 226..448
e-value: 7.6E-30
score: 103.4
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 190..447
e-value: 2.73195E-33
score: 124.326
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 172..417

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004470-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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