TCONS_00003413-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003413-protein
Unique NameTCONS_00003413-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length836

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003413-protein ID=TCONS_00003413-protein|Name=TCONS_00003413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=836bp
MLFMKLLLPLFALNLPIANGAEDFYNLLGVSKDATKAQIRRAFKKIAIEK
HPDKNPNDPGAHETFTKINRAYETLKDDDLRKKYDTYGEEGLKDDHFSNQ
YQSWNFYNEQFGIYDDDPEIITLSKADFEQSVSGTEDVWFINFYSPHCSH
CHTLAPVWREVARELNGVIRMGAVNCHDDWMLCRMQGINGYPSLRIYPTG
EYYYGEHEKEKMISHIMSNLEVDVIDLTLTMIKEVMPTSERPWLIAFCDD
ETLIHCMEDGMLIKLSAMLENLVHVARANCLNDVKLCMAFDTSTSLRLVK
IKDQKFQPAVLIPATNAIDILEEVLKLLPEPVTVNDEMFQGIRRKVAEGE
EESWLLIFREDFDDKDLELRKMAGLLPYQKIGQVNCKDEHDLCSRFYLSK
FPTVLFYKSIGYEVHHGRYNAHDITNFVRESDLSNVRVLHPENFPNLKEI
KDNWFIDFFAPWCPPCMKLLPEWRKAGKQIGDSIAKFGTVDCTIHKDLCL
KQNVRSYPTTIFFNKTEEAHIYSGYHSAEDIIAFAEDILKPPVIVLTPES
FEKSINQKELGETWVVDFYAPWCGPCMELAPTYRQLAKRLYGEATLATID
CQKYSYFCNTQNINTYPTIRLYSYQSKDASHYARHQGWRDLESLYTWVFQ
HFPSLVAEADYQTFYDEILNSNDAYLIDFYTSWCGHCHTFAPHYSKLAKR
LEGRVKAVKINCETEYVVCRSVGVRSYPTVVFFPGVLYKGMSQAVTGVHL
NSLDTGYLHDTALHMLANHQRDLERVEKEESGETMTFSSTTTQTPPPTTP
IQDEDDESGYQTFDVHMSGDEDDEQSYYMHYEHDEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001907XLOC_001907Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003413TCONS_00003413Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR018253DnaJ_domain_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
100200300400500600700800Score = Score = 11.668Score = 9.788Score = 10.443Score = 12.508Score = Score = Score = Score = Score = SequenceCoilPR00421G3DSA:3.40.30.10G3DSA:3.40.30.10G3DSA:3.40.30.10G3DSA:3.40.30.10G3DSA:3.40.30.10SFLDG00345mobidb-litecd02961PR00625SM00271PF00226G3DSA:1.10.287.110PS50076cd06257SSF46565PF00085PS51352PS51352PS51352PS51352PS00194PS00194PS00194PS00636SSF52833SSF52833SSF52833SSF52833SSF52833
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 759..779
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 723..734
score: 43.38
coord: 564..572
score: 59.88
coord: 572..581
score: 62.28
NoneNo IPR availableGENE3D3.40.30.10coord: 655..744
e-value: 1.1E-22
score: 79.4
NoneNo IPR availableGENE3D3.40.30.10coord: 534..651
e-value: 9.6E-27
score: 93.2
coord: 215..325
e-value: 0.0077
score: 16.0
NoneNo IPR availableGENE3D3.40.30.10coord: 326..429
e-value: 2.1E-7
score: 30.6
NoneNo IPR availableGENE3D3.40.30.10coord: 430..533
e-value: 1.1E-28
score: 99.4
NoneNo IPR availableGENE3D3.40.30.10coord: 118..214
e-value: 3.5E-23
score: 81.4
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 662..734
e-value: 2.4E-20
score: 67.2
coord: 120..214
e-value: 1.0E-22
score: 74.8
coord: 543..650
e-value: 3.6E-23
score: 76.3
coord: 437..537
e-value: 1.5E-23
score: 77.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..825
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 368..428
e-value: 1.48931E-7
score: 49.1461
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 43..58
score: 43.62
coord: 80..99
score: 29.24
coord: 60..80
score: 38.79
coord: 25..43
score: 43.3
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 22..80
e-value: 8.2E-23
score: 91.8
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 23..85
e-value: 5.7E-22
score: 77.5
IPR001623DnaJ domainGENE3D1.10.287.110coord: 19..117
e-value: 5.3E-26
score: 90.8
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 23..88
score: 21.361
IPR001623DnaJ domainCDDcd06257DnaJcoord: 23..77
e-value: 1.8429E-20
score: 85.6749
IPR001623DnaJ domainSUPERFAMILY46565Chaperone J-domaincoord: 14..91
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 436..535
e-value: 5.8E-19
score: 67.9
coord: 120..216
e-value: 3.4E-17
score: 62.2
coord: 543..647
e-value: 3.0E-21
score: 75.2
coord: 658..735
e-value: 1.2E-20
score: 73.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 541..653
score: 11.668
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 88..237
score: 9.788
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 655..768
score: 10.443
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 418..540
score: 12.508
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 676..694
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 455..473
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 565..583
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 65..84
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 434..541
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 538..652
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 648..735
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 330..430
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 68..221

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MLFMKLLLPLFALNLPIANGAEDFYNLLGVSKDATKAQIRRAFKKIAIEKHPDKNPNDPGAHETFTKINRAYETLKDDDLRKKYDTYGEEGLKDDHFSNQYQSWNFYNEQFGIYDDDPEIITLSKADFEQSVSGTEDVWFINFYSPHCSHCHTLAPVWREVARELNGVIRMGAVNCHDDWMLCRMQGINGYPSLRIYPTGEYYYGEHEKEKMISHIMSNLEVDVIDLTLTMIKEVMPTSERPWLIAFCDDETLIHCMEDGMLIKLSAMLENLVHVARANCLNDVKLCMAFDTSTSLRLVKIKDQKFQPAVLIPATNAIDILEEVLKLLPEPVTVNDEMFQGIRRKVAEGEEESWLLIFREDFDDKDLELRKMAGLLPYQKIGQVNCKDEHDLCSRFYLSKFPTVLFYKSIGYEVHHGRYNAHDITNFVRESDLSNVRVLHPENFPNLKEIKDNWFIDFFAPWCPPCMKLLPEWRKAGKQIGDSIAKFGTVDCTIHKDLCLKQNVRSYPTTIFFNKTEEAHIYSGYHSAEDIIAFAEDILKPPVIVLTPESFEKSINQKELGETWVVDFYAPWCGPCMELAPTYRQLAKRLYGEATLATIDCQKYSYFCNTQNINTYPTIRLYSYQSKDASHYARHQGWRDLESLYTWVFQHFPSLVAEADYQTFYDEILNSNDAYLIDFYTSWCGHCHTFAPHYSKLAKRLEGRVKAVKINCETEYVVCRSVGVRSYPTVVFFPGVLYKGMSQAVTGVHLNSLDTGYLHDTALHMLANHQRDLERVEKEESGETMTFSSTTTQTPPPTTPIQDEDDESGYQTFDVHMSGDEDDEQSYYMHYEHDEF100200300400500600700800Expect = 0.00e+0 / Id = 41.41Expect = 1.69e-33 / Id = 41.41Expect = 1.30e-43 / Id = 41.41Expect = 2.47e-21 / Id = 41.41SequenceDJC10
Match NameE-valueIdentityDescription
DJC101.303e-4341.41DnaJ homolog subfamily C member 10 OS=Homo sapiens... [more]
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