Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002421-protein ID=TCONS_00002421-protein|Name=TCONS_00002421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1524bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00002421-protein vs. Swiss-Prot (Human)
Match: PRKDC (DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3) HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0 Identity = 475/1449 (32.78%), Postives = 772/1449 (53.28%), Query Frame = 0 Query: 6 AHKEDMRGETLFLELRRLYHCAAYNCIISIISCTQVELKFYTGLLFTENVAKGQFLLENLIDTDREYKFESVLNSHFDRKQTLSMLRRNKEDDGLNDANTKSRSRGKANAGYLST-QFLMETSLSQDVNRFDFNDPIEAYSNYSTNNIDSVPANSP-------DTTIVEDNTPLSPDSESSNNTSTLSPTSTLMEMDELNQHEIMSILLSLIHHMKNKQIYKPPTDTQLTAQPPPPLPSWMVYLQKKLTARDTHVNIKLFIAKLIINEPKIFEPYGTYWYPSLIDLILSSHIPGPPINYFTIDLVVVMLSWS----KTNIPPDTVVSRNMCSSLLEYLIKYTHHTNRSVLKNNLQVIKTLLQVWKDRLQIPYQLIHTFFNNQDSEKKDSSTGLQLLGLVIKADFSPFAPQSSAGLSKHEFFTNLTNCLHF-KYKEVYATAAEVCGLALNYYQEHQEANELEFLLGNVSQELSNHSKKNKDLLVLCVFHMQSYYPNIVDRYIAPLLYCVTELYGVLRTNCIQALTSRVQHLTNEQHQEIYKQIQGKDLEGLLSHRDEEAQSETIRLIHGMLPNLTTDQLSEVLPLIANLQQNEYTSVRELTYDVFIWIYENCREDESR-----KSVLQLSKEVLVLGINDSNTKLSLKVLNFWRDESNLPKETIERTIEVVRALYSSKTEREYLSYASNLIMQLTSLSPDYTLPLFPNGLDSDEHFRNFNVNFSWQRQQTANLTPLFIATQRSTAS------QGSYSLTQKSQGEFMGIRATQTTFDFTQTQQKDNQTGSLNWMNPTVQVDSSLATLSNARQSSPTSILSDTPMDIDSIDGRPINARRRPSQSQNPD-----------------KAA----DILRLKRKFLKDQMTRNQHFAAIEIKRQKMREVAMERRKAAKDKKVSMYRKYRVGELPDIQIKHSELIVPLQALSQLDSKMGTKLFTSVLNAIISNLPEKLDENSVDRVYRDLEQALDIMLRSSTINESAFTSALQNL-CYTNKQLKLEPGLISTSSTASMQQPVGILLLEKQLLSNMGNGEKSAKRRRMESEKPEDVATWLEVSRLYESIDDFDWLRSVFSSHVSQSETTKNALSAETQNNYELALSLYKKATEENMSNENTPTESEEEYLDNARMRCYQNLCLWDKLKKFTTSSAAQLLDQDDSVGEGGSFDAMALWKDDELQETHLPYYIQSNIKLLCQGKVDHVSDDFDSFITNSLKEGAPKEHLQGKYSLQLALLNIFKDDLGAGEHFLNISSQQFLSEWSVLSTLVSASRQKKLEQLQKIVELEEYISMRKANGHHQAK-QVESLLNTWSNRLPSLKA-PLHVWDDIVMTRCSLIRKLKS-----ANEDDLNLSKYLDGEETKNI---------------------LFIADVARKQGNLAVCNQYLKESYNGAISNDQTMNLSFQWRYIYSKL 1380 A E+M GE LE RRLYHCAAYNC IS+I C ELKFY G LF+E K + ENLID R Y F + +RK+ +R+ + D++ S Y+S+ +L +++LS+++++FDF+ +++YS YS+ D PA D T+ +D L EMDELN+HE M+ L +L+ HM PP + + P LPSWM +L KL +NI+LF+AKL+IN ++F PY +W L+ L S + G I+Y +++V +LSW+ T +P D V++ + LL +L+K+ H R+V ++NL++IKTL++ WKD L IPY+LI F+ +D KD+S G+QLLG+V+ D P+ PQ G+ E+F L N + F +YKEVYA AAEV GL L Y E + E E L V+++L H +D ++C+ + +P + DR++ + + + + +GVL+T C++ + RV+ +T E+Y Q++ KD ++ HRD+E Q + +I+ M+P L +L E+L + + T+ RE Y++ +WI++N R+ ES + + +L+K+VL+ G+ D N L L + NFW E+ LP T++R + + +LYS K E +LS A+N ++++TS+SPDY P+F + L S+ F+ + ++ W+ + T LTP+F+ TQ S + +GS S G+ IRATQ DFT TQ D ++ S +W+ SS L + S S+L R +R P +S PD K A D+LRL+R+F++DQ + +A + QK + K +D +V +YR YR G+LPDIQIKHS LI PLQA++Q D + +LF+S+ + I+ + + + + + + L Q + L ++ F S +Q++ C L L+P +S AS+QQPVGI LLE+ LL + E AKR R ++ P DV W+E+++LY SI ++D LR +F+S + + T++AL AE +++Y A Y +A + + PTE+E+++ + A + CY +L W L+ +T+S +D ++ D +W + QET+LPY I+S +KLL QG+ D +FI ++ K L+ YS +L+LL + +DD+ ++++ Q F+ +S + L+ SR KL+ +Q + E++E+IS G+ ++ ++ LLNTW+NR P K P+++WDDI+ RC + K++ ++ +N+ + DG+ + + + + D ARKQ N ++ + LKE + + + D + W Y +L Sbjct: 1922 AFTENMAGENQLLERRRLYHCAAYNCAISVICCVFNELKFYQGFLFSEKPEKNLLIFENLIDLKRRYNFPVEVEVPMERKKKYIEIRKEAREAANGDSDGPS---------YMSSLSYLADSTLSEEMSQFDFSTGVQSYS-YSSQ--DPRPATGRFRRREQRDPTVHDDVLEL--------------------EMDELNRHECMAPLTALVKHMHRS--LGPPQGEEDSV--PRDLPSWMKFLHGKLGNPIVPLNIRLFLAKLVINTEEVFRPYAKHWLSPLLQLAASENNGGEGIHYMVVEIVATILSWTGLATPTGVPKDEVLA----NRLLNFLMKHVFHPKRAVFRHNLEIIKTLVECWKDCLSIPYRLIFEKFSGKDPNSKDNSVGIQLLGIVMANDLPPYDPQ--CGIQSSEYFQALVNNMSFVRYKEVYAAAAEVLGLILRYVMERKNILE-ESLCELVAKQLKQHQNTMEDKFIVCLNKVTKSFPPLADRFMNAVFFLLPKFHGVLKTLCLEVVLCRVEGMT-----ELYFQLKSKDFVQVMRHRDDERQKVCLDIIYKMMPKLKPVELRELLNPVVEFVSHPSTTCREQMYNILMWIHDNYRDPESETDNDSQEIFKLAKDVLIQGLIDENPGLQLIIRNFWSHETRLPSNTLDRLL-ALNSLYSPKIEVHFLSLATNFLLEMTSMSPDYPNPMFEHPL-SECEFQEYTIDSDWRFRSTV-LTPMFVETQASQGTLQTRTQEGSLSARWPVAGQ---IRATQQQHDFTLTQTADGRS-SFDWLT-----GSSTDPLVDHTSPSSDSLL--------FAHKRSERLQRAPLKSVGPDFGKKRLGLPGDEVDNKVKGAAGRTDLLRLRRRFMRDQEKLSLMYARKGVAEQKREKEIKSELKMKQDAQVVLYRSYRHGDLPDIQIKHSSLITPLQAVAQRDPIIAKQLFSSLFSGILKEMDKFKTLSEKNNITQKLLQDFNRFLNTTFSFFPPFVSCIQDISCQHAALLSLDPAAVSAGCLASLQQPVGIRLLEEALLRLL-PAELPAKRVRGKARLPPDVLRWVELAKLYRSIGEYDVLRGIFTSEIGTKQITQSALLAEARSDYSEAAKQYDEALNKQDWVDGEPTEAEKDFWELASLDCYNHLAEWKSLEYCSTAS----IDSENPP------DLNKIWSEPFYQETYLPYMIRSKLKLLLQGEADQ---SLLTFIDKAMHGELQKAILELHYSQELSLLYLLQDDVDRAKYYIQNGIQSFMQNYSSIDVLLHQSRLTKLQSVQALTEIQEFISFISKQGNLSSQVPLKRLLNTWTNRYPDAKMDPMNIWDDIITNRCFFLSKIEEKLTPLPEDNSMNVDQ--DGDPSDRMEVQEQEEDISSLIRSCKFSMKMKMIDSARKQNNFSLAMKLLKELHKESKTRDDWL---VSWVQSYCRL 3283 The following BLAST results are available for this feature:
BLAST of TCONS_00002421-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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