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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002418-protein ID=TCONS_00002418-protein|Name=TCONS_00002418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=591bp MACNKQNGKSKKNPTAHKTIPTGFQFEIAGTERKEFECPICLCIMRNATE LPCEHLMCQECLEYFEQDKVACAKRNGQAKFQCSVCMTPYKKDDKKAVRS VDRMIQTTVLVKCLQSGCDWIGCIQDQPEHDRKCRSVRMQCPYHSIGCLA RFKQGELTEHIKTNQENHCMLVLIAVNGLAKEKEKYCQKIADQNKKLESY ECFETLLQGNIKRLDVLERDNLELKSKLGNYEKLAHENASILQRLESLEQ KYDALLKAVAFSNPARLQNLVAENKALSQTVSELKKMVQNQPSNVHLDVG RCQQLLLESSKHAKRLNALESENKELKKIAKEQKKEITTLTEGLDHLKKD VSREQKRVNSEFADFNRLIESMTGEVAYLEEDIVGLTSFAEKVSKLHLQL SDKQLWEASSVIQFLKKKHYDSHATVQKWDKLSDDIRYDLSTIKVEDTSY LDTLQQAVSSYKETIFPHAWNARIKKLFDFLPYGYLVGAYVKVACGPLNH IKVDVYRSVVEFNLETSKEKYHKHSSLVASYRHYSEDCLHVAFYHYRAIE SLRLLNWDDEVKSKKLMPGKMVNLDDQFSGYGCVILEMSRK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 302..350 |
None | No IPR available | COILS | Coil | Coil | coord: 214..258 |
None | No IPR available | COILS | Coil | Coil | coord: 267..287 |
None | No IPR available | GENE3D | 1.20.1170.10 | | coord: 156..296 e-value: 0.0031 score: 16.0 |
None | No IPR available | GENE3D | 1.20.5.320 | | coord: 350..477 e-value: 0.0032 score: 16.9 |
None | No IPR available | GENE3D | 1.10.287.540 | | coord: 315..349 e-value: 0.2 score: 11.1 |
None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 33..107 |
IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 38..86 e-value: 0.0016 score: 27.7 |
IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 38..86 score: 9.421 |
IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 37..72 e-value: 4.66596E-4 score: 37.4252 |
IPR027370 | RING-type zinc-finger, LisH dimerisation motif | PFAM | PF13445 | zf-RING_UBOX | coord: 38..83 e-value: 6.8E-6 score: 25.9 |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 105..155 e-value: 7.9E-10 score: 38.3 |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 24..104 e-value: 6.2E-10 score: 37.9 |
IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 53..62 |
IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 110..176 |
Blast
The following BLAST results are available for this feature:
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