Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002169-protein ID=TCONS_00002169-protein|Name=TCONS_00002169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
MVDEEATETLAQRHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQL
QAELDQKQQEEIDDEKSTTVNGEGNTSLSEAVEDKLTLQENGEADPPTED
RTSQNGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFD
KILKENQLKIREVQPDGDCLYNSVIVQKFGSSTKEALKELRQKTAGFMRT
NEDDFLPFTSNTKTGDILSTGEF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003323 | OTU_dom |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 40..67 |
| None | No IPR available | COILS | Coil | Coil | coord: 11..31 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..139 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 137..211 |
| IPR003323 | OTU domain | PFAM | PF02338 | OTU | coord: 164..214
e-value: 2.6E-5
score: 24.6 |
| IPR003323 | OTU domain | PROSITE | PS50802 | OTU | coord: 158..223
score: 13.425 |
Blast
BLAST of TCONS_00002169-protein vs. Swiss-Prot (Human)
Match: OTU6B (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.127e-35 Identity = 83/212 (39.15%), Postives = 131/212 (61.79%), Query Frame = 0 Query: 12 QRHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQLQAELDQKQQEEIDDEKSTTVNGEGNTSLSEAVEDKLTLQENGEADPPTEDRTSQNGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFDKILKENQLKIREVQPDGDCLYNSVIVQKFGSSTKEALKELRQKTAGFMRTNEDDFLPFTSNTKTGDILSTGEF 223
+RH++E+KELQ KIQ +K+ +PK DKKR+KQ+T ++A+L+ E++QK +EE++ K TT + N S AV + EN PP + SKAQKRREKK E+ER++R+ E E E+ R++E+ + +IL QL+I+++ DG C+Y ++ Q + LR +TA +M+++ +DFLPF +N TGD+ + EF
Sbjct: 17 RRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTT---KENKIDSVAVNISNLVLEN---QPP----------RISKAQKRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEF 212
The following BLAST results are available for this feature:
BLAST of TCONS_00002169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| OTU6B | 8.127e-35 | 39.15 | OTU domain-containing protein 6B OS=Homo sapiens G... | [more] |
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