TCONS_00002157-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002157-protein
Unique NameTCONS_00002157-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1022

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002157-protein ID=TCONS_00002157-protein|Name=TCONS_00002157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1022bp
MKGKFCFHTPSEIKVVGSFLLKTMIKANHSIDIAVQMPQAVLHGKDYLNY
RYYYKRAIYLSWLAYYLKDWEHTEDLSFTCGTNIFKPTLKINLKGKVGKK
FNVVLHLATPEGHFKLSRFLPLKNNIRHNWYHGYEQDTTEEIEFPTADYN
NGVLEDMLYEDHLRLLYSTLKECPGMSEAILLLKTWLKQRSYKGNVPFNG
FCCSMLLVYLLSVRKISAHMSSYQMFRLTLHFIGTSDWSKEGITLNKDTN
EDEKLPSLKDFHGVYPVVFVDSSGHLNLCSSLDTISYQMLRYEAQQSLAL
LDSTEEGSFELLFIKTKSFLQTVDHMFRINDAGSFTTKLSTEENNKLISY
GGNARPILLEKMSEILRRGLDERITSLFMKPSPLVQWSVNESCPDSSKGP
ITVGVCLNASNYDNVLIMGPPADQPQAKEFRAFWGEKSELRRFQDGSINE
AVVWPSSNSSQKKMVCKQIVQHLLKLHCAIYPSSIDYHGNSFDFILSSNT
SSFEHASANQKKATIPRGCGEEESTHVIKTFEELSRQLRGLSELPLVVNN
IHAVDPLLRMTEPLTARQYEVKEQSKGQDFLVPSNAKRSPLWCPVIKAYI
QFEGSGQWPDNLEAIQHIRAAFHIKVAECIRQQLHFPAKATPRWIDVMKN
GYVFRLSVIHYREMVLHKENVALGKSKTSHDIQAKKLEMEIVKKPLHNSL
IHSLNGQFGAFSLTCRLAKRWMSSQMLSNHFYEELIELLVASVFLSPNPP
NSSLCGFVRFLDHIATFDWNANPLIVNLNSEIKSESMEALKERFTNSRDH
LPHMVVMTPYDVDGTLWTKQQPSPQVVKRLSLLAQAALALVESDGFEFTQ
QTIMQLFRPSTKDYDIVIELDKNHVPKLPFIQSSKSVHKSSDVKLASMVS
NNVSNEVLPVVDFDPARSFLDQLQELFNDTAMFFCDQYGGSQIGVVWKRN
KLAAQPFKIMNAKYKHVEEDVAQKKKKKQKAKDTKITTNEETMLKTNTKA
IIQDFSILGQGLVKNIQVVNQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001124XLOC_001124Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002157TCONS_00002157Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
1002003004005006007008009001000SequenceCoilPF17404PF17407PF17406PF17403PF17405G3DSA:1.10.1410.10PF03813
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 964..984
NoneNo IPR availablePFAMPF17404Nrap_D3coord: 320..479
e-value: 1.2E-41
score: 142.4
NoneNo IPR availablePFAMPF17407Nrap_D6coord: 862..1016
e-value: 1.5E-27
score: 96.4
NoneNo IPR availablePFAMPF17406Nrap_D5coord: 708..859
e-value: 5.0E-46
score: 156.3
NoneNo IPR availablePFAMPF17403Nrap_D2coord: 176..315
e-value: 2.7E-40
score: 137.5
NoneNo IPR availablePFAMPF17405Nrap_D4coord: 512..705
e-value: 9.7E-44
score: 149.2
NoneNo IPR availableGENE3D1.10.1410.10coord: 153..318
e-value: 6.0E-12
score: 44.8
coord: 676..858
e-value: 6.7E-8
score: 31.6
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 31..171
e-value: 2.1E-34
score: 118.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002157-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MKGKFCFHTPSEIKVVGSFLLKTMIKANHSIDIAVQMPQAVLHGKDYLNYRYYYKRAIYLSWLAYYLKDWEHTEDLSFTCGTNIFKPTLKINLKGKVGKKFNVVLHLATPEGHFKLSRFLPLKNNIRHNWYHGYEQDTTEEIEFPTADYNNGVLEDMLYEDHLRLLYSTLKECPGMSEAILLLKTWLKQRSYKGNVPFNGFCCSMLLVYLLSVRKISAHMSSYQMFRLTLHFIGTSDWSKEGITLNKDTNEDEKLPSLKDFHGVYPVVFVDSSGHLNLCSSLDTISYQMLRYEAQQSLALLDSTEEGSFELLFIKTKSFLQTVDHMFRINDAGSFTTKLSTEENNKLISYGGNARPILLEKMSEILRRGLDERITSLFMKPSPLVQWSVNESCPDSSKGPITVGVCLNASNYDNVLIMGPPADQPQAKEFRAFWGEKSELRRFQDGSINEAVVWPSSNSSQKKMVCKQIVQHLLKLHCAIYPSSIDYHGNSFDFILSSNTSSFEHASANQKKATIPRGCGEEESTHVIKTFEELSRQLRGLSELPLVVNNIHAVDPLLRMTEPLTARQYEVKEQSKGQDFLVPSNAKRSPLWCPVIKAYIQFEGSGQWPDNLEAIQHIRAAFHIKVAECIRQQLHFPAKATPRWIDVMKNGYVFRLSVIHYREMVLHKENVALGKSKTSHDIQAKKLEMEIVKKPLHNSLIHSLNGQFGAFSLTCRLAKRWMSSQMLSNHFYEELIELLVASVFLSPNPPNSSLCGFVRFLDHIATFDWNANPLIVNLNSEIKSESMEALKERFTNSRDHLPHMVVMTPYDVDGTLWTKQQPSPQVVKRLSLLAQAALALVESDGFEFTQQTIMQLFRPSTKDYDIVIELDKNHVPKLPFIQSSKSVHKSSDVKLASMVSNNVSNEVLPVVDFDPARSFLDQLQELFNDTAMFFCDQYGGSQIGVVWKRNKLAAQPFKIMNAKYKHVEEDVAQKKKKKQKAKDTKITTNEETMLKTNTKAIIQDFSILGQGLVKNIQVVNQV1002003004005006007008009001000Expect = 0.00e+0 / Id = 36.34SequenceNOL6
Match NameE-valueIdentityDescription
NOL60.000e+036.34Nucleolar protein 6 OS=Homo sapiens GN=NOL6 PE=1 S... [more]
back to top