TCONS_00001593-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001593-protein
Unique Name	TCONS_00001593-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	792

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001593-protein ID=TCONS_00001593-protein|Name=TCONS_00001593-protein|organism=Clytia hemisphaerica|type=polypeptide|length=792bp
MTVRKRANHTSNSESKDDNTKNEEATEKKTDFPKALTNGSASKVKENDNG
PLISIHLDISLYLRNLRESLTTLSKQDFAEVPLHIWKVLINRSKHQYKPL
KGFNLFWFYMIFSVALFTRFYTITLPKHVCWDETHFGKFANHYLNGTFFL
DVHPPLGKMLLALAGWMTGYNGEFSFEKPGMEYGEHRYVGMRAFCALLGC
FCVPLAYLIVWELTHNLPACILAASLILFDHGCITISQYILLDPILMFFI
MMSVYSLLKFYSWRDCPFSFDWWGWMFVTGYFLACTFSVKWVGLFVILFA
GMTTVQDLWDILGDLSNSLVDVGKHFIARAIGLILLPIFIYLFFFAVHFQ
ALPKSGPGDGFFSSSFQSTLEGNKLYKAVLPGELGYGAVVTLKNHKTAGT
LLHSHQHLYPKEHPPEQQQITGYSHKDSNNDWQINKAHHLITEDDRLEYV
RDGDEVRLMHVQTRRNLHSHPEKAPISTNLHQVSGYGQDGNGDANDIWLI
RITKNPGPDNRISTVKTIFQLVHRNTGCVLQETEKQLPKWGWEQKEMACN
PNKFVTIVGSEWNIESNTHKKVPQVSVELLSPSFFESVYESHVVMAKTNN
GFKPKEGEFTSQAWHWPINYRGQVFSGGDERVYLLGNPIVWWLICGTYFL
YVIVYVIQTLRWKRGYKFDATIYAEYTTMVSSCSWLFMGWALHYLPFYAM
GRVLYFHHYFPAYLFSAMFSGILLEHVSRTVSYMFSGERRKHVYYFCLAT
VLAIAISSFCMFRGLSYGMSGPMGNQPNQTMAAYRWLDTWDI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000832	XLOC_000832	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001593	TCONS_00001593	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016093	MIR_motif
IPR032421	PMT_4TMC
IPR003342	Glyco_trans_39/83

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0000030	mannosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006493	protein O-linked glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006493	protein O-linked glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0000030	mannosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016093	MIR motif	SMART	SM00472	mir_2	coord: 447..503 e-value: 7.8E-13 score: 58.6 coord: 510..567 e-value: 0.9 score: 16.5 coord: 381..437 e-value: 1.3E-8 score: 44.6
IPR016093	MIR motif	PFAM	PF02815	MIR	coord: 401..553 e-value: 2.2E-26 score: 92.8
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 447..503 score: 13.521
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 381..437 score: 11.099
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 509..567 score: 8.921
IPR016093	MIR motif	SUPERFAMILY	82109	MIR domain	coord: 384..554
IPR032421	Protein O-mannosyl-transferase, C-terminal four TM domain	PFAM	PF16192	PMT_4TMC	coord: 584..790 e-value: 6.2E-50 score: 169.5
IPR003342	Glycosyl transferase family 39/83	PFAM	PF02366	PMT	coord: 110..352 e-value: 1.4E-79 score: 267.0
None	No IPR available	GENE3D	2.80.10.50		coord: 381..577 e-value: 1.6E-47 score: 160.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43

Blast

[Close]

BLAST of TCONS_00001593-protein vs. Swiss-Prot (Human)
Match: POMT2 (Protein O-mannosyl-transferase 2 OS=Homo sapiens GN=POMT2 PE=1 SV=2)

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 344/698 (49.28%), Postives = 462/698 (66.19%), Query Frame = 0

Query:  107 WFYMIFSVALF---TRFYTITLPKHVCWDETHFGKFANHYLNGTFFLDVHPPLGKMLLALAGWMTGYNGEFSFEKPGMEYGEHRYVGMRAFCALLGCFCVPLAYLIVWELTHNLPACILAASLILFDHGCITISQYILLDPILMFFIMMSVYSLLKFYSWRDCPFSFDWWGWMFVTGYFLACTFSVKWVGLFVILFAGMTTVQDLWDILGDLSNSLVDVGKHFIARAIGLILLPIFIYLFFFAVHFQALPKSGPGDGFFSSSFQSTLEGNKLYKAVLPGELGYGAVVTLKNHKTAGTLLHSHQHLYPKEHPPEQQQITGYSHKDSNNDWQINKAHHLITEDDRL------EYVRDGDEVRLMHVQTRRNLHSHPEKAPISTNLHQVSGYGQDGNGDANDIWLIRITKNPGPDNRISTVKTIFQLVHRNTGCVLQETEKQLPKWGWEQKEMACNPNKFVTIVGSEWNIESNTHKKVPQVSVELLSPSFFESVYESHVVMAKTNNGFKPKEGEFTSQAWHWPINYRGQVFSG---GDERVYLLGNPIVWWLICGTYFLYVIVYVIQTLRWKRGYKFDATIYAEYTTMVSSCSWLFMGWALHYLPFYAMGRVLYFHHYFPAYLFSAMFSGILLEHVSRTVSY-MFSGERRKHVYYFCLATVLAIAISSFCMFRGLSYGMSGPMGNQPNQTMAAYRWLDTWD 791
            W+ ++  V L    TRF+ +  P H+CWDETHFGK  ++Y+N TFF DVHPPLGKML+ LAG+++GY+G F F+KPG +Y  H Y+GMR FCA LG + VP AYL V +L+ +L A +L A+L+ FD GC+T+SQYILLDPILMFFIM ++ S++K+ S  D PFS  WW W+ +TG  LA    VK+VGLF+IL  G+ T+ DLW + GDLS SLV VGKH  AR + LI+LP+ +Y   FAVHF  L KSGPGDGFFSS+FQ+ L GN L+ A +P  L YG+V+T+KN + A   LHSH+HLYP+     QQQ+T Y HKD NN W I K +   T  D L      E+VR GD +RL H +T RNLHSH  +AP++   +QV+GYG +G GD+ND W I +  N    NRI  +++  + +H  TGCVL  + K LPKWGWEQ E+ C P    T+  S WN+E + + K+P +S+++L PSF E + ESH+VM + N+G KPK+ EFTS+ WHWPINY+G  FSG    D RVYLLGNP+VWWL   +  LY++   I  +  +RG +  A +      ++     + +GW LHY PF+ MGRVLYFHHYFPA LFS+M +GIL + + R  ++ + S    + ++   + ++L     SF +F  L+YGM GP+   P   MA  RWLD+WD
Sbjct:   57 WWALLALVTLLSFATRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDKYEHHSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAMLSMVKYNSCADRPFSAPWWFWLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLTARVLCLIVLPLALYTATFAVHFMVLSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKHN---TNSDPLDPSFPVEFVRHGDIIRLEHKETSRNLHSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVV-NRKFGNRIKVLRSRIRFIHLVTGCVLGSSGKVLPKWGWEQLEVTCTPYLKETL-NSIWNVEDHINPKLPNISLDVLQPSFPEILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWLNLLSIALYLLSGSIIAVAMQRGARLPAEVAGLSQVLLRGGGQVLLGWTLHYFPFFLMGRVLYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWPLARGIHVAGILSLLLGTAYSFYLFHPLAYGMVGPLAQDPQSPMAGLRWLDSWD 749

The following BLAST results are available for this feature:

BLAST of TCONS_00001593-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001593-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
POMT2	0.000e+0	49.28	Protein O-mannosyl-transferase 2 OS=Homo sapiens G...	[more]

You are here

TCONS_00001593-protein (polypeptide) - C. hemisphaerica

ZOOM

x 1

POSITION

0

ZOOM

x 1

POSITION

0