TCONS_00001108-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001108-protein
Unique Name	TCONS_00001108-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	573

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001108-protein ID=TCONS_00001108-protein|Name=TCONS_00001108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=573bp
MPPKKPTTNSTNAKKGTVAPKQNIRKATTTKASPANAKSPGKVLKKSSSK
TKTSSPPKPSKETLAAIKIQKIIRGFLAKRKLLKKKKEKKDYELLIENIQ
KEAWLDIVRREQEEENKRREKEDSERRRKAQEKKWIKTFLEAAFDGELQD
LKKILKEVEENIRNICSNDDPETLKRKIKRTRMKFIECEDANANSALSEA
SAGGDLETVTFLLENGANINSIGHFHRTPLYRAAFGGHVDSLKKILTNGG
DPRIVDLDGVLPEQVAATPEIISILQEWDHSKTEELLLQIHEKEDQIKSQ
EEAFLKKEKKRIEDEIKDLETDHQNKQKVLQKSYAELNKRIYEHDECVAK
GFERTDVTLQSIHDAEIDLARAQRNEEEARKKLFEAKLHLREQKVEGGEE
DDVRIAKCNFKELDQVLMLDVGDVVKNSGKWPLILDSSNQAVTFLKYRDT
NYLNLLNPKDVEHETLRKALLGAMRFGKSLVLDMLEVDMFNFLETRLNEI
QDNLYLDLINKELVTSNRYLKLIRKEDGKEYQKENFNQSRLERFQVVIIS
KIFDPPEAWMDTFYTLRIITQAK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000625	XLOC_000625	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001108	TCONS_00001108	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR000048	IQ_motif_EF-hand-BS
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 362..389
None	No IPR available	COILS	Coil	Coil	coord: 105..134
None	No IPR available	COILS	Coil	Coil	coord: 283..329
None	No IPR available	COILS	Coil	Coil	coord: 141..168
None	No IPR available	COILS	Coil	Coil	coord: 82..102
None	No IPR available	PFAM	PF13637	Ank_4	coord: 194..243 e-value: 2.7E-7 score: 30.9
None	No IPR available	PFAM	PF12781	AAA_9	coord: 422..544 e-value: 3.2E-8 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	CDD	cd00204	ANK	coord: 166..275 e-value: 5.02983E-15 score: 70.8754
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 192..221 e-value: 0.11 score: 21.6 coord: 225..254 e-value: 0.13 score: 21.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 192..224 score: 10.392
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 225..257 score: 8.897
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 61..83 e-value: 0.0056 score: 25.9
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 65..82 e-value: 1.6E-4 score: 21.1
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 62..91 score: 9.432
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 83..278 e-value: 3.5E-22 score: 78.1
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 192..267 score: 19.014
IPR020683	Ankyrin repeat-containing domain	SUPERFAMILY	48403	Ankyrin repeat	coord: 165..276

Blast

[Close]

BLAST of TCONS_00001108-protein vs. Swiss-Prot (Human)
Match: YH010 (Putative IQ motif and ankyrin repeat domain-containing protein LOC642574 OS=Homo sapiens PE=5 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 2.343e-103
Identity = 210/602 (34.88%), Postives = 333/602 (55.32%), Query Frame = 0

Query:    3 PKKPTTNST--NAKKGTVAPKQNIRKATTTKASPANAKSPGKVLKKSSSKTKTSSPPKPSK---------ETLAAIKIQKIIRGFLAKRKLLKKKKEKKDYELLIENIQKEAWLDIVRREQEEENKRREKEDSERRRKAQEKKWIKTFLEAAFDGELQDLKKILKEVEENIRNICSNDDPETLKRKIKRTRMKFIECEDANANSALSEASAGGDLETVTFLLENGANINSIGHFHRTPLYRAAFGGHVDSLKKILTNGGDPRIVDLDGVLPEQVAATPEIISILQEWDHSKTEELLLQIHEKEDQIKSQEEAFLKK-EKKRIEDEIKDLETDHQNKQKVLQKSYAELNKRIYEHDECVAKGFERTDVTLQSIHDAEIDLARAQRNEEEARKKLFEAKLHLREQKVEGGEEDDVRIAKCNFKELDQVLMLDVGDVVKNSG------------------------KWPLILDSSNQAVTFLKYRDTNYLNLLNPKDVEHETLRKALLGAMRFGKSLVLDMLEVDMFNFLETRLNEIQDNLYLDLINKELVTSNRYLKLIRKEDGKEYQKENFNQSRLERFQVVIISKIFDPPEAWMDTFYTLRI 568
            P  P   +    A++G+  P++  R A    A     + PG   + +SS       P+  +         E  AA  IQ   R   A+R+L ++++E+++Y   +E  QKEA+L  VRREQE   + RE+E++ +R + +E +  +  L+AAFDG++ +++ +LKEVE+ +       D     R+++R R+   ECED+  N+ LSEA+AGG    +    E GA+ NS G F  TPLYRAAFGGH+ +++ +L  G DPR+   DG  PE+VA+   ++S+L+ WD S TE  +LQ  E E Q ++QE    K+ E +R+  +++ L  + Q   K LQ++Y EL++RI EHD+C  +  ++T +TLQ+I D E  + R ++  ++A + L  A+L LREQ  EG  E++    KC   EL  VLM DVG+ ++  G                        +WPL++D   QA TFL+Y+DTNY++ +NP+ +  ET+  ALLGA+R+GK LV D+ E D+F  ++ +L  +Q+               RYL L+R  DG EY    F + RLE F++  ++K+  PP   +     +R+
Sbjct:   19 PSSPFLGAPELRARRGSQDPRR--RGAGEVPADLGPLRVPGS--RAASSCGLCGREPRLGRAGGFESRPAEDRAARAIQGAFRQLRARRELARRREERREYLEQMETPQKEAYLAPVRREQEAARRLREQEEAAQRERREELQRRRRLLDAAFDGDVGEIRAVLKEVEQLLTREGVGHDEAGEARRLQR-RVALAECEDSYGNTPLSEAAAGGQPLAIQLRAELGASPNSKGAFGPTPLYRAAFGGHLAAVEVLLKLGADPRVYAEDGSTPERVASLDTVVSVLRSWDLSLTEA-MLQNMEAEQQRRAQEAQRHKEAEAERMTLKVQQLTREQQQCHKELQQAYCELSRRISEHDQCEWRCMDKTKLTLQAIKDTEAQVDRLRQEAQKAEEALAMARLELREQTQEG--EEEAPGLKCQVTELHDVLMKDVGNRIRADGRSVLRARRGRFGVWTDSSDLMGVPRWPLVIDPLGQAATFLRYQDTNYVDTVNPEPLRPETMWLALLGALRYGKPLVFDLREEDLFPVVQRQLEAVQE---------------RYLSLLRPTDGPEYSPTQFQEQRLEHFRLFFVTKVQWPPAEQLQVLLPVRV 597

The following BLAST results are available for this feature:

BLAST of TCONS_00001108-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001108-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
YH010	2.343e-103	34.88	Putative IQ motif and ankyrin repeat domain-contai...	[more]

You are here

TCONS_00001108-protein (polypeptide) - C. hemisphaerica

ZOOM

x 1

POSITION

0

ZOOM

x 1

POSITION

0