achaete-scute like (polypeptide) - C. hemisphaerica

Overview
Nameachaete-scute like
Unique NameTCONS_00000914-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000914-protein ID=TCONS_00000914-protein|Name=achaete-scute like|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MYSMASTFQYSENSAFSPVPFEVYDYPPVVSSSSVDPQALLADYELRHNQ
AMVDHWVNVHQQSPPYDTPSVPYGFFTYPYLQECLSSEPGFIRKRNERER
MRVRNVNEGYARLRDHLPLEPTEKRLSKVETLRGAIRYIKLLQSVLGEPK
QAMTPSATTTQRRTSDRSDGEFDGRNYER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000539XLOC_000539Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000914TCONS_00000914Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 96..148
e-value: 1.2E-17
score: 74.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 93..167
e-value: 1.8E-15
score: 56.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 94..143
e-value: 3.6E-16
score: 58.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 90..142
score: 15.021
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 93..146
e-value: 2.53948E-17
score: 71.4763
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 90..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..179

Blast
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BLAST of achaete-scute like vs. Swiss-Prot (Human)
Match: ASCL4 (Achaete-scute homolog 4 OS=Homo sapiens GN=ASCL4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.268e-26
Identity = 54/85 (63.53%), Postives = 59/85 (69.41%), Query Frame = 0 
Query:   88 EPGFIRKRNERERMRVRNVNEGYARLRDHLPLEPTEKRLSKVETLRGAIRYIKLLQSVLGEPKQAMTPSATTT-QRRTSDRSDGE 171
            EP F+RKRNERER RVR VNEGYARLRDHLP E  +KRLSKVETLR AI YIK LQ +L      +  +A    QRR    SDGE
Sbjct:   70 EPAFLRKRNERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLERQAWGLEGAAGAVPQRRAECNSDGE 154
The following BLAST results are available for this feature:
BLAST of achaete-scute like vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASCL41.268e-2663.53Achaete-scute homolog 4 OS=Homo sapiens GN=ASCL4 P... [more]
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