TCONS_00000581-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000581-protein
Unique NameTCONS_00000581-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1072

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000581-protein ID=TCONS_00000581-protein|Name=TCONS_00000581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1072bp
PNKDLVNFNNDEDDFKMPSTKSSSNKQCQSTPVRRSVRKSGSCSGSKKRK
QNNRRLRSESKRQCLSEKGSNTSTMEPYTNEDETRILDTPDRELAKTIDF
EQSVGETPGNSTSILNTCLSIDPIDEKDESNNSVEISFQDPNKTLSAPED
DFLCDRTIGENNETNVLDHCLPLESSGVDLFQPDKSKIDKTVIKESNETK
LFDDFNFTKNESALVNMNLTDIESSANSYPENTFYGLPMTVKDMLLQIRG
IPSLYEWQNDCLNLSSVINRKNIVYSLPTSGGKTLVAEILMMQEILVKQR
NVILVLPYVSIVQEKVRDLSPFAVQLGFHIEEYASRKGCLPPKKRRRKNS
IFIATIEKANAIINSLVENERTEELGKVVVDELHMIGEGGGRAALLEILL
TKIMFKFTHVQIIGMSATLGNMDDLKKFLNAQIFTNEFRPVELTEYVKLE
DTLYKVDSMAKTDEELCVVNRQITHPVGFKEENKRSDPDHLCSLALEVIP
QHSCMVFCATKKNCENVALLIAQGLPRDLRNHREEEKYALLQNIHNVANG
VCKTLARTIPFGIAYHHSGLTMDERKLVEEAYSSGVLCLLCCTSTLAAGV
NLPAKRVILRSPYVGNQCMSRAQYKQMIGRAGRAGIDSSGESILVIAKKD
KNKLHKLIRGAMGSCSSSLMYEKGKGLRQLILSLLGLKICDSVSELENLL
RTTLYHVQETSTNAATYDKENQKPKREDSESLFQMINKQIEALMSMSMIS
RKSSPCPSRENSQESITIEGESQTKDEQNKADVSNDTNDKKRTTDDPVDG
VNVGLTPSKLVITDIGRATVKGCIDIDFVPTLYKDLKKSLQGIVLATELH
LLYLATPIDQTAILTVKWMTYYRQFSKLNENETKAAEMIGIQEGMLMKKA
TGSSSKKFEETTYKRFYLTLMLYLLVKKKTIWYVAELFETTRGFLQNLLS
SATSFTSLLVYFTAEIPEFWTLKLLFQDLVSHLTNTGDVDLLPLMEIPGV
KQARARQLFKKGYHSLKDLASAEVGKLCQEIEFLPRKQANLIISSAKMLL
QEKVEALREEADEIAGVSGDAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000344XLOC_000344Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000581TCONS_00000581Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
1002003004005006007008009001000Score = 12.939Score = 16.539Expect = 1.2E-21 / Score = 76.4Expect = 2.6E-26 / Score = 91.8Score = Score = Score = Score = SequenceSM00490PF00271PS51194SM00487PS51192G3DSA:3.40.50.300G3DSA:1.10.150.20G3DSA:3.40.50.300mobidb-litemobidb-litecd00079cd00046SSF158702PF00270SSF52540
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 549..635
e-value: 3.7E-17
score: 73.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 489..635
e-value: 1.9E-10
score: 41.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 490..685
score: 12.939
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 250..446
e-value: 4.2E-10
score: 49.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 264..437
score: 16.539
NoneNo IPR availableGENE3D3.40.50.300coord: 40..464
e-value: 1.2E-21
score: 76.4
NoneNo IPR availableGENE3D1.10.150.20coord: 990..1049
e-value: 4.1E-13
score: 49.0
NoneNo IPR availableGENE3D3.40.50.300coord: 471..797
e-value: 2.6E-26
score: 91.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..800
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableCDDcd00079HELICccoord: 472..645
e-value: 1.32369E-13
score: 68.4184
NoneNo IPR availableCDDcd00046DEXDccoord: 278..419
e-value: 1.65499E-11
score: 62.3548
NoneNo IPR availableSUPERFAMILY158702Sec63 N-terminal domain-likecoord: 889..1047
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 266..423
e-value: 1.4E-11
score: 44.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 559..648
coord: 470..523
coord: 268..422

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000581-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
1002003004005006007008009001000Expect = 0.00e+0 / Id = 54.84Expect = 1.35e-63 / Id = 54.84SequenceHELQ
Match NameE-valueIdentityDescription
HELQ1.345e-6354.84Helicase POLQ-like OS=Homo sapiens GN=HELQ PE=1 SV... [more]
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