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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000506-protein ID=TCONS_00000506-protein|Name=TCONS_00000506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2388bp
INVSMFERLINAPTMHTIPSSCLSIQRRMRKNICDLTREFYDEIVEIEDH
EKCQTKKIGDQHVPAKPQRRRFRHAISYGNDPALNLLRKCVGKGREVPGV
LPHIYFWTHSGAQTKAHVGLSRVNNTEANMAVKLTEYLVKCGVPKQSIAI
LTPYKGQLMLMRKDMISNGLLDKFSAEDSVRMSTVDRFQGDEADIVIISL
VIDDKSRTGFVKLRNRLVVLLSRARLGMYILGNISYFENGKVDESVAHWT
ETIRKLREPAESDTDPKSINENLEEINYHGPRLGEELPICCPVHRERTVT
VKNANQLQLGFCDVQCTAELSCSHLCNIPCHYPKMDTHNTQCMEKIKQPP
CQQHGQNLTCSDVYSNLSQRNQRQHIVYRAARMKIDEALRKYRCPTQVDV
QLPCQHEVQMPCADETDIANGTAKYPECQQLSINPYVYDGCCHQLQVLCC
VWYEYKKDPSRAPTCKQKVFYTPSCGHSIKVQCFLKQNYENGTHPFQCVQ
KVNVVLPRCGHKAEVFCDEAKKLEGWTGQKCAPGVVVEGQSYGSTDHICD
QQVDFYRKCGHTTKMKCYEAFQQAAFGGKCSENVDIINPECGHTATIPCS
QKQQLESRGVLKHCSPITEVHQGRNQFGPSVLHTQCEQNVKLVRKCGHES
TVKCHMSHDKLLQDCKETIIVQNRLCGHDVKLPCSLSAMMASWDPWGKGH
PPLLRGNILHTPRITSWCSPPSQIAKYVDKCKEIVGVQRDTCDHSFDMKC
SEVMKKLIGNTLLIDKCQEKIVNAQLQCGHTKDYKCFEYQEYLSDPSKTN
CREDVNLTCWNFKICGNLIKSTCNKAGMQVACKAKSTWICPNNHSFENVD
LCTKGFPSHCPKCIVKSIVYFADELKTKEPGDLQIPRHLPSELQLYGPKP
ICTPGMLQAFIASQINALQSLEKWCKNEQSWRRPCLDIAMVPCFRYGKED
LNVDFKTYFKAGSLNGVQLNEWTLNNVTKLTRETSNHLCILFGIVFCCRV
LVDPQDYPGKNKKAHQKNGWVHKQRNEGYSVLQHNRMNGWDHLIVWDPYP
MMATHKVWLSIRDLQSIVSVMQQQKPPPVRAELKPSYPKFEIPEDAKSEV
SLMTYEDDEQEDVIQTKPVDKVTQRKIKSWDGFALGRANVFDEHKQKELL
SKLQFCITASGSNAASEKPFDGINYINHLKKSNQKKEVPDLLLLEALEQQ
RADDFEESKKAFEQYLNKVPVDDLHPLHYIAKARQILHQDPTSQEGKDLL
LRFSNSFPMDYVDRWMTEDEKQLLLSNSGDDEDGADAADPESPINKWETL
KEEENFECEQMDELMKLTGLRKVKKSAFDIFKSSLKFSRLSPELQKANPR
TLNYCFLGNAGSGKTTVARMLAGILKDSGARPSGKLVETSAQKLKDDGPE
EFRKLADSAEGSVLFIDEAYDLDPKGDLKGKPIVSELLVIAENKRDKLSI
ILAGYEDDMNQKLFSYNEGIKSRFEMVYFEDFNEKELKTIWEGELKSRKF
RSDEKASVVVSKRLAKQSGRKGFGNARAVRKEVEKAITIAIGREDFDEND
SLIRIEDVMGESPLNNPKLQDVLDEIKEKIGWSVIKKSVAELLDLCTKNY
EREMLGQKTLPIMLNRLFLGNPGTGKTTCAELYGRLLKELNILSVGDVVM
ASTSDLVGSHVGESQRKTNEMLEKARGKVLVIDEAYNLDDNMYGKQVLDT
IVEKVQNTESDDIAVLLLGYEKQMREMLRNQNPGLARRFSADYPFMFEDY
SQKELLQILKLVCKKENIILTSKVQQKVIEMLEKQKTQANFGNAGAINNL
IRAAIAKAATRPTRPDGKMLLEVSDIDSDADKEDDPNADPFAPLDKLYRM
ETIKEELIQIKNTFQVAKDEGAKDMPELGHFVFRGAPGTGKTTVARTMAK
ILFDLRLLPRNHVEQTSGLDLTGEYVGQTKKKVQERLDAAKGGVLFIDEA
YELGKGMYGEEALTTLLAAMTDPEYKLVIIIAGYPKDMEQMLARNVGLKS
RFTRYMDFLDWTSEDCVKFFIKKAENDNFAIDEQTKNIVGKGCEELRSYP
GWGNARDLIAMWKVIIEQRASRVVNALEDRKTITKEDCHKAVSKMLSERK
PKVDSKELERSRKKDEERMMHDLMKQMTLDDAQKSIQTCTKEEVKIEEIK
EEEGEEEVEEKMEKMELKEEKKEEERDAGVPDEVWEELQKVKMQEELARR
KLEEEIKNAKQLKDTNERLEKKLKAEMEEERKQKHKLDLHTKKAKEEAEL
LDRLQRELHEAREEEKRLQLQRELEARRRQEEELRKQLEEERERQRKEQE
RLLRIQRQLEADRKRLEEEARKRAEAMRNKEAVQQKLRQIGNCPAGFQWR
KIRGGWRCGGGSHFVSNKELEEQFTHEVDFPGLGTSFF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 2185..2336 |
| None | No IPR available | COILS | Coil | Coil | coord: 1850..1870 |
| None | No IPR available | COILS | Coil | Coil | coord: 2150..2178 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1853..2008
e-value: 3.3E-16
score: 58.6 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1551..1739
e-value: 7.5E-17
score: 60.9 |
| None | No IPR available | PFAM | PF13087 | AAA_12 | coord: 2..234
e-value: 1.2E-31
score: 109.8 |
| None | No IPR available | GENE3D | 1.10.8.60 | | coord: 1740..1852
e-value: 0.27
score: 10.9 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1285..1504
e-value: 1.6E-16
score: 59.6 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 25..263
e-value: 4.2E-27
score: 94.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2150..2180 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2213..2245 |
| None | No IPR available | CDD | cd00009 | AAA | coord: 1617..1740
e-value: 2.42048E-8
score: 53.6891 |
| None | No IPR available | CDD | cd00009 | AAA | coord: 1348..1477
e-value: 4.30118E-9
score: 56.0003 |
| None | No IPR available | CDD | cd00009 | AAA | coord: 1876..2008
e-value: 1.14329E-11
score: 64.0895 |
| IPR000641 | CbxX/CfqX | PRINTS | PR00819 | CBXCFQXSUPER | coord: 1575..1589
score: 23.75
coord: 1615..1630
score: 64.84
coord: 1653..1667
score: 40.42
coord: 1667..1686
score: 59.38
coord: 1793..1805
score: 32.21 |
| IPR003593 | AAA+ ATPase domain | SMART | SM00382 | AAA_5 | coord: 1612..1728
e-value: 1.7E-4
score: 30.9
coord: 1350..1565
e-value: 7.0E-8
score: 42.2
coord: 1877..1992
e-value: 4.6E-6
score: 36.1 |
| IPR003959 | ATPase, AAA-type, core | PFAM | PF00004 | AAA | coord: 1617..1723
e-value: 4.3E-10
score: 40.0
coord: 1355..1461
e-value: 2.2E-8
score: 34.5
coord: 1883..2004
e-value: 9.3E-15
score: 55.1 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 2..50
coord: 93..284 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1578..1811 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1319..1544 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1845..2096 |
Blast
BLAST of TCONS_00000506-protein vs. Swiss-Prot (Human)
Match: ZNFX1 (NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.961e-28 Identity = 158/655 (24.12%), Postives = 236/655 (36.03%), Query Frame = 0
Query: 9 LINAPTMHTIPSSCLSI-------QRRMRKNICDLTREFYDEIVEIEDHEKCQTK--KIGDQHVPAKPQRRRFRHAISYG---NDPALNLLRKCVGKGREVPGVLPHIYFWTHSGAQTKAHVGLSRVNNTEANMAVKLTEYLVKCGVPKQSIAILTPYKGQLMLMRKDMISNGLLDKFSAEDSVRMSTVDRFQGDEADIVIISLVIDDK-SRTGFVKLRNRLVVLLSRARLGMYILGNISYFENGKVDESVAHWTETIRKLREPAESDTDPKSINENLEEINYHGPRLGEELPICCPVHRERTVTVKNANQLQL---GFCDVQCTAELSCSHLCNIPCHYPKMDTHNTQCMEKIKQPPCQQHGQNLTCSDVYSNLSQRNQRQHIVYRAARMKIDEALRKYRCPTQVDVQLPCQHEVQMPCADETDIANGTAKYPECQQLSINPYVYDGCCHQLQVLCCVWYEYKKDPSRAPTCKQKVFYTPSCGHSIKVQCFLKQNYENGTHPFQCVQKVNVVLPRCGHKAEVFCDEAKKLEGWTGQKCAPGVVVEGQSYGSTDHICDQQVDFYRKCGHTTKMKCYEAFQQAAFGGKCSENVDIINPECGHTATIPCSQKQQLESRGVLKHCSPITEVHQGRNQFGPSVLHTQCEQNVKLVRKCG 647
++ A T+ T+ +C + Q R N+ DL + F E+ E K ++ QH P+ R Y N P+ V K ++ GV +++F H+ + + G S N EA+ V+L +Y + I ILT Y GQL +RK M + VR+ VD++QG+E DI+++SLV ++ + GF+++ NR+ V LSRA+ GMY +GN+ V W++ I LRE ++G L +CC H E V A+ Q G C + C L C H+C CH QCM+ PCQ+ + C + +RCP L C E Q PC Q+ + P C H+ V C V P C++ + CGH C G Q ++ + +CGH V C VEG YG C + CGH C+ F + F +C + + C H PC + C P Q R +H+QC+ +KCG
Sbjct: 1011 VLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMC-PEIARLLTPHIYQDLENHPS-------VLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTF-------AGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAK------VPLWSKIIHTLRE---------------------NNQIGPMLRLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK-----PCQK----VICQE----------------------------GHRCP------LVCFQECQ-PC-----------------QVKV-PKTIPRCGHEQMVPCSV-------PESDFCCQEPCSKSLRCGHRCSHPC--------GEDCVQLCSEMVTIKLKCGHSQPVKCGH-----------------VEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCF-EGRFHERCQQPCKRLLI-CSHKCQEPC-----------IGECPPCQRTCQNR------CVHSQCK------KKCG 1504
The following BLAST results are available for this feature:
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