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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000505-protein ID=TCONS_00000505-protein|Name=TCONS_00000505-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1176bp
MNDRGRGGGRGRGRGRRHGRGGLGGATSYGGSNQSLNNDLYGSNTSLNGA
GILGGSPQNHGGQRRGGGRGGHSRGGGGGNYHGDWLCPNCRETNFSRRTD
CFKCHTPKGLNAATPPRGDGNLGRAGSAGGGGGNCGRGGGRGGRGGNRGG
SNPGGGGQQGGPNWTCLACGESGNFANRNQCYKCKTNKDGTISANAALSN
PARSANNIDQEIMFIQLLAKAKNIGSVVEQNSSIYRRAFKMCKQLKIHQV
EILITTMAKLRASFMFEEPPMIAHCKEVVDIYVDHYAKTKGDFGYEEASV
VHVEQVLYYVERLLQIEWPEAHEEVKIQLSAILSKVYDLIVMSNKQHREK
SNKITDMIESLEKEWTIKTKASTKESRKDAKKKDKRRAASEVSRWENATI
EWLSDPKYFQANYLPKMKVPGDKRSQGVYSDKKDYFDTICRLWIGLTFED
GNKALSPKCRDRQQGATKECGTVLWQVPNGNRAEVCRSCRKDTVSYVCQN
MRHRGGLCSRCCMGAKQRLMGPKDAKGMASTHIYDFTVKSVDFEGRIYLF
GMDCRKPPQQQIHWKSTSRLKVSCLVAVVKVQDRNAPLKRTDRIIWAEVK
QYDRDARDEFKRREGGQMVVSDLRDSKDDGENELRPGDHVVVIDCMTFVP
EHIPVLKALEDLQLSTLPFNDGALLNISIGGKTAPIDFDKEFQKLSARKQ
RRRLSSYQDDYPRSDDDDESESDEEQSYNMPSIENLVDFMVDQSKLEPLI
QIRRDNPNETSRLKQKLRDLIKKTTLDREQLKSFIETFVEPVHLTQGPPG
TGKSYLGVVIVRALIMIRQAWINTCQVLEMPILVLSYKNHAIDEFLVDLV
KAEGSLSLLRIGSSQNPSLHHYLEQNQRSYVDVTRKYKNTLTNLYQQKTR
YQQIKDDLSPLSGHQAHQGSQPTSKEEQDAKNKASYNAATYLCNIIARVQ
KIESFLEKEEQDVESDSESEDSGYSDCNITNLWNDLFSARIEPNMETGHM
ERVGKLKLENKDIETLSERVAHYNKPVPEILFQWIIGRYPLPKCGVADCF
INVNAIGVSYCYQHICQLVNEQGISVCSNLRLPTHQFFCEDHACKFEGEE
VCLAVRMDPPQTFCEDHACFVCVRNAPDKVANAAEDEEPRNTCADHPLCT
AMTGEDSCLNEVVPKTSYCQDHAFPI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 344..364 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 774..1029
e-value: 1.0E-8
score: 34.4 |
| None | No IPR available | PFAM | PF13086 | AAA_11 | coord: 776..965
e-value: 1.2E-10
score: 41.5 |
| None | No IPR available | GENE3D | 4.10.1060.10 | | coord: 72..109
e-value: 1.1E-9
score: 36.9
coord: 148..191
e-value: 0.001
score: 17.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 910..932 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 107..159 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 699..728 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..78 |
| IPR001876 | Zinc finger, RanBP2-type | SMART | SM00547 | zf_4 | coord: 162..187
e-value: 4.7
score: 6.5
coord: 83..107
e-value: 4.0E-5
score: 33.0 |
| IPR001876 | Zinc finger, RanBP2-type | PFAM | PF00641 | zf-RanBP | coord: 83..108
e-value: 1.3E-5
score: 24.3 |
| IPR001876 | Zinc finger, RanBP2-type | PROSITE | PS01358 | ZF_RANBP2_1 | coord: 85..104 |
| IPR001876 | Zinc finger, RanBP2-type | PROSITE | PS50199 | ZF_RANBP2_2 | coord: 81..110
score: 9.597 |
| IPR001876 | Zinc finger, RanBP2-type | SUPERFAMILY | 90209 | Ran binding protein zinc finger-like | coord: 76..109 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 722..862 |
Blast
The following BLAST results are available for this feature:
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