TCONS_00000141-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000141-protein
Unique NameTCONS_00000141-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000141-protein ID=TCONS_00000141-protein|Name=TCONS_00000141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MSPLIYTCLAFIFIVIAFCFYIGMFRSISIKVSKPPFPVGGHYLYKFYQT
PYAEARMAYRAINKFPIKKTFKLVGIYYDDPDKVKEDSTRYAVGILVNND
DFDKNKELASTMGSVGYQHIQLPQIDSVVTTCFPLRSVLSILVAIQRVYP
KLNNFIKKEKLQAHPCTEYYPHGMEEMHFINPLEKNDSFYVPEYHVTYVE
YIDSKED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000080XLOC_000080Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000141TCONS_00000141Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011256Regulatory factor, effector binding domainGENE3D3.20.80.10coord: 21..184
e-value: 9.4E-7
score: 28.6

Blast
[Close]
BLAST of TCONS_00000141-protein vs. Swiss-Prot (Human)
Match: TX264 (Testis-expressed protein 264 OS=Homo sapiens GN=TEX264 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.308e-24
Identity = 62/197 (31.47%), Postives = 94/197 (47.72%), Query Frame = 0 
Query:   17 AFCFYIGMFRSISIKVSKPPFPVGGHYLYKFYQTPYAEARMAYRAINKFPIKKTFKLVGIYYDDPDKVKEDSTRYAVGILVNNDDFDKNKELASTMGSVGYQHIQLPQIDSVVTTCFPLRSVLSILVAIQRVYPKLNNFIKKEKLQAHPCTEYYPHGMEEMHFINPLEKNDSFYVPEYHVT------YVEYIDSKED 207
            AF  Y G+   + +    PP        YKF+   Y E    +       I    + + +YYD+P  V  D  R AVG +++  +   + EL       G++    P    VVT  FP  ++LSI +A +RV+P L+ +IK+ KL A+P  E Y    +++HF+ PL +   FYVPE   T       VE ID++ D
Sbjct:   23 AFAGYSGLLAGVEVSAGSPPI-RNVTVAYKFHMGLYGETGRLF--TESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGFKVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQE--DQIHFMCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVD 214
The following BLAST results are available for this feature:
BLAST of TCONS_00000141-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TX2643.308e-2431.47Testis-expressed protein 264 OS=Homo sapiens GN=TE... [more]
back to top