TCONS_00000140-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000140-protein
Unique NameTCONS_00000140-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000140-protein ID=TCONS_00000140-protein|Name=TCONS_00000140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MQYFYAITLLACACSIQALYDSSDDVVELTGGNFNHKVINSDQIWLVEFY
APWCGHCKSLAPEWKKAAKALKGVVSVGAVDMDVHGSVGGPYNVRGFPTI
KVFGANKNSPQDYNGARTAQALVDEALKAVQRSVKDKLNGRGGSSRGGSG
GSGGGSSGDAVVELTDANFEKEVLNAKEPVLVEFFAPWCGHCQRLEPEWK
KAAAELKGKVKLGALDATAHPNMAQRFQVQGYPTIKYFRAGVKDFNSAQD
FQGGRTASDIIAFALELHSESVEPPEIMELTSNKILEDNCNEKPLCIVSF
LPDILDTQASGRNNFLTVLRELGDKYKAKLWGWVWTSAATHQKLEQALGI
GGFGYPAMAVVNIRKKVFVGLRGSFSKDGIDELLRSIAVGRGRTEKLTNG
LPSIKAVESWDGLDGKMPEEEDIDLSDIELDDLDDEPKKKNDEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000079XLOC_000079Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000140TCONS_00000140Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR005788Disulphide_isomerase
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
molecular_function GO:0016853 isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 228..239
score: 39.44
coord: 45..53
score: 60.12
coord: 53..62
score: 65.89
NoneNo IPR availableGENE3D3.40.30.10coord: 14..130
e-value: 2.3E-33
score: 113.9
NoneNo IPR availableGENE3D3.40.30.10coord: 286..406
e-value: 2.2E-10
score: 40.2
NoneNo IPR availableGENE3D3.40.30.10coord: 154..285
e-value: 1.8E-34
score: 118.4
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 161..265
e-value: 5.4E-34
score: 111.1
coord: 26..123
e-value: 4.4E-30
score: 98.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..444
NoneNo IPR availableCDDcd02983P5_Ccoord: 274..404
e-value: 1.08887E-55
score: 181.781
NoneNo IPR availableCDDcd03001PDI_a_P5coord: 160..265
e-value: 1.39412E-56
score: 183.257
NoneNo IPR availableCDDcd03001PDI_a_P5coord: 25..127
e-value: 1.0957E-64
score: 204.443
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 26..125
e-value: 7.3E-29
score: 99.7
coord: 161..263
e-value: 1.3E-30
score: 105.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 5..122
score: 11.377
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 123..269
score: 16.076
IPR005788Disulphide isomeraseTIGRFAMTIGR01126TIGR01126coord: 30..124
e-value: 4.1E-32
score: 108.6
coord: 164..265
e-value: 3.4E-32
score: 108.8
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 46..64
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 181..199
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 18..128
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 285..386
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 158..267

Blast
[Close]
BLAST of TCONS_00000140-protein vs. Swiss-Prot (Human)
Match: PDIA6 (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 486.493 bits (1251), Expect = 6.482e-171
Identity = 240/437 (54.92%), Postives = 312/437 (71.40%), Query Frame = 0 
Query:    4 FYAITLLACA--CSIQALYDSSDDVVELTGGNFNHKVINSDQIWLVEFYAPWCGHCKSLAPEWKKAAKALKGVVSVGAVDMDVHGSVGGPYNVRGFPTIKVFGANKNSPQDYNGARTAQALVDEALKAVQRSVKDKLNGRGGSSRGGSGGSGGGSSGDAVVELTDANFEKEVLNAKEPVLVEFFAPWCGHCQRLEPEWKKAAAEL----KGKVKLGALDATAHPNMAQRFQVQGYPTIKYFRAGVKDFNSAQDFQGGRTASDIIAFALELHSESVEPPEIMELTSNKILEDNCNEKPLCIVSFLPDILDTQASGRNNFLTVLRELGDKYKAKLWGWVWTSAATHQKLEQALGIGGFGYPAMAVVNIRKKVFVGLRGSFSKDGIDELLRSIAVGRGRTEKLTNG-LPSIKAVESWDGLDGKMPEEEDIDLSDIELDDL 433
               + L++C    ++  LY SSDDV+ELT  NFN +VI SD +WLVEFYAPWCGHC+ L PEWKKAA ALK VV VGAVD D H S+GG Y V+GFPTIK+FG+NKN P+DY G RT +A+VD AL A+++ VKD+L GR G    G  G    SS   V+ELTD +F+K VL++++  +VEF+APWCGHC+ LEPEW  AA+E+    KGKVKL A+DAT +  +A R+ ++G+PTIK F+ G     S  D+ GGRT SDI++ AL+L S++  PPE++E+ +  I +  C E  LC+V+ LP ILDT A+GRN++L VL +L DKYK K+WGW+WT A    +LE ALGIGGFGYPAMA +N RK  F  L+GSFS+ GI+E LR ++ GRG T  +  G  P+I   E WDG DG++P E+DIDLSD+ELDDL
Sbjct:    3 LLVLGLVSCTFFLAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVDADKHHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRSDSSSKKDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKG----ESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKRTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELETALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDL 435
The following BLAST results are available for this feature:
BLAST of TCONS_00000140-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIA66.482e-17154.92Protein disulfide-isomerase A6 OS=Homo sapiens GN=... [more]
back to top