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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002411 ID=TCONS_00002411|Name=TCONS_00002411|organism=Clytia hemisphaerica|type=transcript|length=2577bp
CGTTTCACTACTAAAATACCTTAAGAGAAACAATTTTCGTTGGAACTAAT
TTTGCTTTTTGCACGGTTTTTTGTtaaaaccgcaaaaatttgAAGTGCCC
ACGAAAATATTTGCAACCACCGTGAAAAAATCAAgagaataatttcaaaa
tttcaaattgagcGAAacacttttgatatttttaactAGTTGTATAAAGC
AAAAATCAATTACagcaaaattagattttttagattattttttcgACAGC
GAAAATTAGGTCCCTTAACATTAGTATGCATTGCATAAAGAAGCTATCTT
TTACAAAATGTTCTATTTGCTTACAAGCTGTTTCTTCTCGAAGAGTACGA
AAATTGCTCAGactaaaaatacaatatctacTATATGAGTTTTTACGTCC
CTAAAAAGGACTTCGTTTTAATTCATTTGaataaaatacacattttttta
taagcaacctcAATTTTCGGCTCAGGGCTAGAGTTGCTAAggattttcag
gatttcagccaaaaagttGTTTAtggattttaagccaaaaatgcCTAAca
acttcaaaatttttttgatttttatctcATTTANCTTATGGATTTTAAGC
CAGAAATGCCTAAcaacttcaaaattttttgctttttatctcATTTAATG
AACAAAATACGTCAAATTAGGTATTCAAATACCATTCGTACACATTTTGA
TGCAAAATAATATCGAAAATGCCTCTTTATTAGGTACTCTTGGTCGCTTT
CCAGGCTCATGCTCCGTttcaatagatattcaattcctaagatgattgaa
taggttttaGAAATTGGAATATTAATTGAACaaacaagtcataaaatttc
gcataaattataaggattttactttatataaaaatttgtccacTTTTTTT
CTGGGAAACACTGTATCacattagcgaggttaagtaaatcggcaaaatca
cgacgacgaatgAAAacttaacaggctagtgagtttcaaccaatcaaatt
tcgtattttcactagccaattacatttttcgtccgtcgtcgtgattatcc
tggtatgcttaacctcagtattaACCTTATTATAGGCATGGCGAATCAta
caatttttaagaaaagtaGACAAGAATCCATTTAATACTGTCAGTTTCAT
CTTTTACGAATCATCAGCTAATCAGCTAGGCATGGTGAATCTCCATTATC
CTTTCTGGGAAAAGTGACTTGTAAAACAAAATGTTTCACAAAGAGCTCTC
AAAATTCTTGACTATCATAGCTTGCAGTATCAAATGTATCCTCGCTATTA
TTTGAAGTTAAATCAATCTGAAACGGTTCCAGAATCGATTTTTTCGTTGC
TCGATTCGCATTGCTTGAATCAAAATTCTCTTCGTAAAAACTCGAAGGGT
CTACTTTCAAAAGCGAATCATGATTGTATAGCTGTGTTTTAGCTCCAGCC
AAACCCTTCTCCTGGACGGCTGTAAAGTCACTAACGCTAGATTCGAACAG
AATTTCTTTACTTCTCTTTGAAAGAGGTGGTTCCTCAGTTTTAACGTCGA
TTCTATTGCTCTCGTTTTCCCGTTTTAATGGACTTTTCATTGGACTCTTC
ATAGCTTTACCTTTTGGattgaaaaagcttttactCTGAATCTTATACAG
CTCATCGTTCCGATAAGCATTTAAATTCCTTGCATCTCTCTTGTACACCA
CAACAAAATCAGTCTCTTTCAAGAGACGTTCATTAATTTTGACACGATGC
GTTTTACACAAATGGGTCACCATTTCTAAATTCTTCTTAAAAGTGATATC
CAAATTTTGCACTTCTTTTTTTAAGCGTCCAAACTGGTCATACTGGTTCA
CCATCATATCAAAAACTTTGataattgtttcagttaatGCTTTGTTATCA
CTACCACTGCCTTCCTTAAGAGCTATAAGGAACTCGACATAAGCAAAAAT
AACAAGGGCTATTCTCTCAAAATCGTTGTTAGCACGAATGTATAAACACT
TACTGCTCGCATCCATCCATATAAAGCTCTGTAGATCACTCATATCATTT
GTATCATAAATTTTAGCAGATTTACTCCAAAATATACTTCCTACGAAACC
ATTCTGCAAACGATCACGATTAAATTTGGAGATATCATCTTTGGtaatca
tttgtttatctttagcTTCGATACCCACAATGCCAAGCTCTGGCACACGA
ATTCTGACATCACATGAACGCATTTTATTCTGCGTATCAATAACACAATC
GAAATTCAACATCCTTTTTGTTTGAACTAAAGCGTATTTGATCTCCTCTT
CAAAAGTTTTCCCTTTGGCTGAAGACTCTACATGTTTGTACTGTTCAGTT
TTATAGATAAGCTGCTCGGCTTGTTTTACAGTTTCTCTATTTTCTCGAGC
CTCGTCTTGTAGCTTTTCAGtttctttttgtgctttttgAAGTTCTTCGT
TCTTGGTCTGTAGCTTTTGTTCATTTACTTTCTTTTCACGAAGCAATTTC
TGGTGTGCTTTTTCTTTGGCAAGTCGTTCATTGCGTAACTGTTCTTGAAT
TACCAAATTAATTTTGTTTAGAATGCT Run BLAST on NCBI protein sequence of TCONS_00002411-protein >TCONS_00002411-protein ID=TCONS_00002411-protein|Name=TCONS_00002411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
SILNKINLVIQEQLRNERLAKEKAHQKLLREKKVNEQKLQTKNEELQKAQ
KETEKLQDEARENRETVKQAEQLIYKTEQYKHVESSAKGKTFEEEIKYAL
VQTKRMLNFDCVIDTQNKMRSCDVRIRVPELGIVGIEAKDKQMITKDDIS
KFNRDRLQNGFVGSIFWSKSAKIYDTNDMSDLQSFIWMDASSKCLYIRAN
NDFERIALVIFAYVEFLIALKEGSGSDNKALTETIIKVFDMMVNQYDQFG
RLKKEVQNLDITFKKNLEMVTHLCKTHRVKINERLLKETDFVVVYKRDAR
NLNAYRNDELYKIQSKSFFNPKGKAMKSPMKSPLKRENESNRIDVKTEEP
PLSKRSKEILFESSVSDFTAVQEKGLAGAKTQLYNHDSLLKVDPSSFYEE
NFDSSNANRATKKSILEPFQIDLTSNNSEDTFDTASYDSQEF Run BLAST on NCBI transcript from alignment at sc0000019:988013..990589 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002411 ID=TCONS_00002411|Name=TCONS_00002411|organism=Clytia hemisphaerica|type=transcript|length=2577bp|location=Sequence derived from alignment at sc0000019:988013..990589 (Clytia hemisphaerica)
AGCATTCTAAACAAAATTAATTTGGTAATTCAAGAACAGTTACGCAATGA
ACGACTTGCCAAAGAAAAAGCACACCAGAAATTGCTTCGTGAAAAGAAAG
TAAATGAACAAAAGCTACAGACCAAGAACGAAGAACTTcaaaaagcacaa
aaagaaaCTGAAAAGCTACAAGACGAGGCTCGAGAAAATAGAGAAACTGT
AAAACAAGCCGAGCAGCTTATCTATAAAACTGAACAGTACAAACATGTAG
AGTCTTCAGCCAAAGGGAAAACTTTTGAAGAGGAGATCAAATACGCTTTA
GTTCAAACAAAAAGGATGTTGAATTTCGATTGTGTTATTGATACGCAGAA
TAAAATGCGTTCATGTGATGTCAGAATTCGTGTGCCAGAGCTTGGCATTG
TGGGTATCGAAgctaaagataaacaaatgattaCCAAAGATGATATCTCC
AAATTTAATCGTGATCGTTTGCAGAATGGTTTCGTAGGAAGTATATTTTG
GAGTAAATCTGCTAAAATTTATGATACAAATGATATGAGTGATCTACAGA
GCTTTATATGGATGGATGCGAGCAGTAAGTGTTTATACATTCGTGCTAAC
AACGATTTTGAGAGAATAGCCCTTGTTATTTTTGCTTATGTCGAGTTCCT
TATAGCTCTTAAGGAAGGCAGTGGTAGTGATAACAAAGCattaactgaaa
caattatCAAAGTTTTTGATATGATGGTGAACCAGTATGACCAGTTTGGA
CGCTTAAAAAAAGAAGTGCAAAATTTGGATATCACTTTTAAGAAGAATTT
AGAAATGGTGACCCATTTGTGTAAAACGCATCGTGTCAAAATTAATGAAC
GTCTCTTGAAAGAGACTGATTTTGTTGTGGTGTACAAGAGAGATGCAAGG
AATTTAAATGCTTATCGGAACGATGAGCTGTATAAGATTCAGagtaaaag
ctttttcaatCCAAAAGGTAAAGCTATGAAGAGTCCAATGAAAAGTCCAT
TAAAACGGGAAAACGAGAGCAATAGAATCGACGTTAAAACTGAGGAACCA
CCTCTTTCAAAGAGAAGTAAAGAAATTCTGTTCGAATCTAGCGTTAGTGA
CTTTACAGCCGTCCAGGAGAAGGGTTTGGCTGGAGCTAAAACACAGCTAT
ACAATCATGATTCGCTTTTGAAAGTAGACCCTTCGAGTTTTTACGAAGAG
AATTTTGATTCAAGCAATGCGAATCGAGCAACGAAAAAATCGATTCTGGA
ACCGTTTCAGATTGATTTAACTTCAAATAATAGCGAGGATACATTTGATA
CTGCAAGCTATGATAGTCAAGAATTTTGAGAGCTCTTTGTGAAACATTTT
GTTTTACAAGTCACTTTTCCCAGAAAGGATAATGGAGATTCACCATGCCT
AGCTGATTAGCTGATGATTCGTAAAAGATGAAACTGACAGTATTAAATGG
ATTCTTGTCtacttttcttaaaaattgtaTGATTCGCCATGCCTATAATA
AGGTtaatactgaggttaagcataccaggataatcacgacgacggacgaa
aaatgtaattggctagtgaaaatacgaaatttgattggttgaaactcact
agcctgttaagtTTTcattcgtcgtcgtgattttgccgatttacttaacc
tcgctaatgtGATACAGTGTTTCCCAGAAAAAAAgtggacaaatttttat
ataaagtaaaatccttataatttatgcgaaattttatgacttgtttGTTC
AATTAATATTCCAATTTCtaaaacctattcaatcatcttaggaattgaat
atctattgaaACGGAGCATGAGCCTGGAAAGCGACCAAGAGTACCTAATA
AAGAGGCATTTTCGATATTATTTTGCATCAAAATGTGTACGAATGGTATT
TGAATACCTAATTTGACGTATTTTGTTCATTAAATgagataaaaagcaaa
aaattttgaagttgTTAGGCATTTCTGGCTTAAAATCCATAAGNTAAATg
agataaaaatcaaaaaaattttgaagttgTTAGgcatttttggcttaaaa
tccaTAAACaactttttggctgaaatcctgaaaatccTTAGCAACTCTAG
CCCTGAGCCGAAAATTgaggttgcttataaaaaaatgtgtattttattCA
AATGAATTAAAACGAAGTCCTTTTTAGGGACGTAAAAACTCATATAgtag
atattgtatttttagtCTGAGCAATTTTCGTACTCTTCGAGAAGAAACAG
CTTGTAAGCAAATAGAACATTTTGTAAAAGATAGCTTCTTTATGCAATGC
ATACTAATGTTAAGGGACCTAATTTTCGCTGTcgaaaaaataatctaaaa
aatctaattttgctGTAATTGATTTTTGCTTTATACAACTagttaaaaat
atcaaaagtgtTTCgctcaatttgaaattttgaaattattctcTTGATTT
TTTCACGGTGGTTGCAAATATTTTCGTGGGCACTTcaaatttttgcggtt
ttaACAAAAAACCGTGCAAAAAGCAAAATTAGTTCCAACGAAAATTGTTT
CTCTTAAGGTATTTTAGTAGTGAAACG Coding sequence (CDS) from alignment at sc0000019:988013..990589 >TCONS_00002411 ID=TCONS_00002411|Name=TCONS_00002411|organism=Clytia hemisphaerica|type=CDS|length=1329bp|location=Sequence derived from alignment at sc0000019:988013..990589 (Clytia hemisphaerica)
AGCATTCTAAACAAAATTAATTTGGTAATTCAAGAACAGTTACGCAATGA
ACGACTTGCCAAAGAAAAAGCACACCAGAAATTGCTTCGTGAAAAGAAAG
TAAATGAACAAAAGCTACAGACCAAGAACGAAGAACTTcaaaaagcacaa
aaagaaaCTGAAAAGCTACAAGACGAGGCTCGAGAAAATAGAGAAACTGT
AAAACAAGCCGAGCAGCTTATCTATAAAACTGAACAGTACAAACATGTAG
AGTCTTCAGCCAAAGGGAAAACTTTTGAAGAGGAGATCAAATACGCTTTA
GTTCAAACAAAAAGGATGTTGAATTTCGATTGTGTTATTGATACGCAGAA
TAAAATGCGTTCATGTGATGTCAGAATTCGTGTGCCAGAGCTTGGCATTG
TGGGTATCGAAgctaaagataaacaaatgattaCCAAAGATGATATCTCC
AAATTTAATCGTGATCGTTTGCAGAATGGTTTCGTAGGAAGTATATTTTG
GAGTAAATCTGCTAAAATTTATGATACAAATGATATGAGTGATCTACAGA
GCTTTATATGGATGGATGCGAGCAGTAAGTGTTTATACATTCGTGCTAAC
AACGATTTTGAGAGAATAGCCCTTGTTATTTTTGCTTATGTCGAGTTCCT
TATAGCTCTTAAGGAAGGCAGTGGTAGTGATAACAAAGCattaactgaaa
caattatCAAAGTTTTTGATATGATGGTGAACCAGTATGACCAGTTTGGA
CGCTTAAAAAAAGAAGTGCAAAATTTGGATATCACTTTTAAGAAGAATTT
AGAAATGGTGACCCATTTGTGTAAAACGCATCGTGTCAAAATTAATGAAC
GTCTCTTGAAAGAGACTGATTTTGTTGTGGTGTACAAGAGAGATGCAAGG
AATTTAAATGCTTATCGGAACGATGAGCTGTATAAGATTCAGagtaaaag
ctttttcaatCCAAAAGGTAAAGCTATGAAGAGTCCAATGAAAAGTCCAT
TAAAACGGGAAAACGAGAGCAATAGAATCGACGTTAAAACTGAGGAACCA
CCTCTTTCAAAGAGAAGTAAAGAAATTCTGTTCGAATCTAGCGTTAGTGA
CTTTACAGCCGTCCAGGAGAAGGGTTTGGCTGGAGCTAAAACACAGCTAT
ACAATCATGATTCGCTTTTGAAAGTAGACCCTTCGAGTTTTTACGAAGAG
AATTTTGATTCAAGCAATGCGAATCGAGCAACGAAAAAATCGATTCTGGA
ACCGTTTCAGATTGATTTAACTTCAAATAATAGCGAGGATACATTTGATA
CTGCAAGCTATGATAGTCAAGAATTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002411-exon-sc0000019-1491911889:988013..990589 | TCONS_00002411-exon-sc0000019-1491911889:988013..990589 | Clytia hemisphaerica | exon |
| TCONS_00002411-exon-sc0000019-1510915933:988013..990589 | TCONS_00002411-exon-sc0000019-1510915933:988013..990589 | Clytia hemisphaerica | exon |
| TCONS_00002411-exon-sc0000019-1575043694:988013..990589 | TCONS_00002411-exon-sc0000019-1575043694:988013..990589 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:988013..990589 . |
Blast
The following BLAST results are available for this feature:
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