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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002096 ID=TCONS_00002096|Name=TCONS_00002096|organism=Clytia hemisphaerica|type=transcript|length=577bp
TTTTAGGCCTAAATATGAAACAAATAAGATAATCGTTTATCATAACAAGG
ATTGGTTTGAAAGtgtgtaatttttatttatcagTGGGAAGAGCGCTTGT
TGAACCGTCAATATGAAATTCAACTTGTCAATGTTGATGGTGTTCGCGAA
GAAATGGAAAATCTTCTTAGGAATCGCACTAgctttgattttgattggtt
tagCTATGGTTATATCTGGTTCCACATTATTAAGCCGGGCAGCTAAGGAT
TCAGAGGCAGGATTTACGGCGTTATTAGTATTTGGTGTGATTTTCTTCGT
CATTGGTATCATCTTAACCGTCATCACTATCGTCATCAAACGCAAGAAAG
ACTCTTTATTTCCTGGACTCAAATGAAACCATTTAGTTATTTTTAGAACT
TATCTTTTATGCTTTccataaatttgtattttacattCAGAAAAAGCTTA
ATATCCCTACATTAAAGTgtgaaaaataaagtttttcgagaatttgacca
ttttttgccttCTTATCGacgattttttaaagaaaatgtacGGAAAGGTC
GATTTCTAGCCAGAGCCTACAATAAAG Run BLAST on NCBI transcript from alignment at sc0000018:988642..990198+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002096 ID=TCONS_00002096|Name=TCONS_00002096|organism=Clytia hemisphaerica|type=transcript|length=1557bp|location=Sequence derived from alignment at sc0000018:988642..990198+ (Clytia hemisphaerica)
TTTTAGGCCTAAATATGAAACAAATAAGATAATCGTTTATCATAACAAGG
ATTGGTTTGAAAGtgtgtaatttttatttatcagTGGGAAGAGCGCTTGT
TGAACCGTCAATATGAAATGTAGGTACATCATTTTCAATATTAGCCTGTA
TATATTcaattattgtattattttgatgtttctgcTATTTAAAGCTTAGC
CTACCTAGATGCTTGTAAACCAAGAATCGAAATTAGCCTTACTTTTAGCA
ATAAAAGGCAACCACTTAAAGAGGCCACNTAATCGGAATTAGCCTTACTT
TTAGCAATAAAAGGCGCTCACTTAAAGAGGCCACTCCCAGCGGTaagtct
gatcacgatatcacgcaattcTTTGTTTTCAACCCCGATCACGAAAGTCC
AGCAAAAATTTGGATAATCACgcattcctttgaaaaagtccaaatcacgc
cctcacagctcaaaaatctttcaaatcacgatcacgttttgacctctgat
cacgcaatcacgaaaaaaattttccaaatcacaTTAATCACGTTACAAAA
ATCCCTATCTCACCATCATGAAAACCGCTCGGTGGGCCTCTTTAAACCGA
ATAGATTTTAATTCAGAAGGCTTTTTAACCGTTAGAAACTCTTATTTCAC
TCTGTATTATCCCTCTCCATTTAATTTTAGTCAACTTGTCAATGTTGATG
GTGTTCGCGAAGAAATGGAAAATCTTCTTAGGAATCGCACTAgctttgat
tttgattggtttagCTATGGTTATATCTGGTTCCACATTATTAAGCCGGG
CAGCTAAGGTAAATATATTTACCTATCTGACATTAAACGTGATTTTGAGA
TTGAGGATTTGTTGAAGATAAGCTGGTTCTGGCAGTTTCATTAGAACTTA
AAACTATCAAATATGATTGATATGGAAGCCCTAATAAGTTTGataaatag
accttatcggagttttttatttttctaaacaagcgatgcattgtgggatt
gtttcgggagtatttcaatagaaatctcttaggaattcctcgagggaatt
ctattgtaatactcccgaaacaatcccacaatgcatcgctatttttttct
tgccgAAACTGTAGAGAAACTGTTAGAGTTAAAGAGTCATTCAAGTTGTA
AAAGTCCCATTTCTAGAGACTCCCTGTAATCATGAAACAATTCCTTATTA
TAATTTTCTCTCCCCTTTCATTTACAGGATTCAGAGGCAGGATTTACGGC
GTTATTAGTATTTGGTGTGATTTTCTTCGTCATTGGTATCATCTTAACCG
TCATCACTATCGTCATCAAACGCAAGAAAGACTCTTTATTTCCTGGACTC
AAATGAAACCATTTAGTTATTTTTAGAACTTATCTTTTATGCTTTccata
aatttgtattttacattCAGAAAAAGCTTAATATCCCTACATTAAAGTgt
gaaaaataaagtttttcgagaatttgaccattttttgccttCTTATCGac
gattttttaaagaaaatgtacGGAAAGGTCGATTTCTAGCCAGAGCCTAC
AATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002096-exon-sc0000018-1491911889:988642..988760 | TCONS_00002096-exon-sc0000018-1491911889:988642..988760 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1510915933:988642..988760 | TCONS_00002096-exon-sc0000018-1510915933:988642..988760 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1575043694:988642..988760 | TCONS_00002096-exon-sc0000018-1575043694:988642..988760 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1491911889:989322..989449 | TCONS_00002096-exon-sc0000018-1491911889:989322..989449 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1510915933:989322..989449 | TCONS_00002096-exon-sc0000018-1510915933:989322..989449 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1575043694:989322..989449 | TCONS_00002096-exon-sc0000018-1575043694:989322..989449 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1491911889:989869..990198 | TCONS_00002096-exon-sc0000018-1491911889:989869..990198 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1510915933:989869..990198 | TCONS_00002096-exon-sc0000018-1510915933:989869..990198 | Clytia hemisphaerica | exon |
| TCONS_00002096-exon-sc0000018-1575043694:989869..990198 | TCONS_00002096-exon-sc0000018-1575043694:989869..990198 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:988642..990198 + |
Blast
The following BLAST results are available for this feature:
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